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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G27710.1 Thale cress nucleus 74.64 68.53
CDY49768 Canola nucleus 53.96 55.42
CDY03991 Canola nucleus 53.96 54.96
CDY00148 Canola nucleus 53.96 54.96
Bra033024.1-P Field mustard nucleus 55.17 51.71
CDY20037 Canola nucleus 53.96 50.76
Bra039068.1-P Field mustard nucleus 53.75 50.57
HORVU1Hr1G018020.1 Barley cytosol 17.85 47.83
AT4G34370.1 Thale cress nucleus 57.2 47.24
AT2G16090.1 Thale cress nucleus 55.78 46.37
KRH24517 Soybean nucleus 53.75 45.69
KRH29521 Soybean nucleus 53.35 45.34
VIT_03s0063g02000.t01 Wine grape nucleus 53.75 44.99
Solyc04g079780.2.1 Tomato cytosol 46.45 43.87
PGSC0003DMT400043486 Potato cytosol 46.04 43.57
Solyc01g109280.2.1 Tomato nucleus 52.13 43.56
PGSC0003DMT400064832 Potato nucleus 51.93 43.39
VIT_18s0001g11740.t01 Wine grape cytosol 48.48 43.06
EER92613 Sorghum nucleus 50.51 41.23
Solyc12g089000.1.1 Tomato nucleus 44.83 41.15
TraesCS4A01G061500.1 Wheat nucleus 51.72 41.13
HORVU7Hr1G068450.2 Barley nucleus 21.3 41.02
TraesCS4D01G238400.2 Wheat nucleus 51.52 40.97
HORVU4Hr1G066180.1 Barley nucleus 51.52 40.97
TraesCS4B01G236900.1 Wheat nucleus 51.32 40.81
PGSC0003DMT400039948 Potato nucleus 44.83 40.7
Os03t0233500-01 Rice nucleus 50.51 40.69
GSMUA_Achr6P23120_001 Banana nucleus 52.94 40.59
Zm00001d028285_P003 Maize nucleus 50.3 40.0
GSMUA_Achr5P01850_001 Banana nucleus 41.78 38.22
TraesCS4D01G070400.1 Wheat nucleus 38.13 35.21
TraesCS4B01G071700.1 Wheat nucleus 38.13 34.75
EER93790 Sorghum nucleus 35.9 32.66
Zm00001d048017_P003 Maize nucleus 50.51 32.55
TraesCS4D01G070600.1 Wheat nucleus 35.5 32.53
TraesCS4A01G243200.1 Wheat nucleus 36.11 32.48
TraesCS4B01G071800.1 Wheat nucleus 35.7 32.06
Zm00001d013716_P002 Maize nucleus 34.48 31.84
Os03t0625800-01 Rice cytosol 34.48 31.48
TraesCS4D01G069600.1 Wheat nucleus 33.87 31.27
TraesCS4A01G244200.1 Wheat nucleus 33.67 30.97
TraesCS4B01G070800.1 Wheat nucleus 33.47 30.78
EER93787 Sorghum nucleus 32.86 30.28
HORVU4Hr1G011770.1 Barley nucleus 32.45 29.8
HORVU4Hr1G011910.1 Barley cytosol, plastid 35.5 28.59
Os03t0626100-01 Rice nucleus 32.25 27.89
Os03t0625933-00 Rice nucleus 16.43 24.62
AT2G31760.1 Thale cress nucleus 23.94 22.96
AT2G31770.1 Thale cress nucleus 24.14 21.92
AT2G31780.1 Thale cress nucleus 19.68 21.9
AT1G05890.2 Thale cress cytosol, endoplasmic reticulum, nucleus 26.17 21.72
AT2G31510.1 Thale cress nucleus 24.75 21.71
AT1G65430.1 Thale cress nucleus 23.73 20.63
AT1G05880.2 Thale cress cytosol 17.04 16.94
AT5G08730.1 Thale cress cytosol 16.02 15.8
AT5G63750.1 Thale cress nucleus 15.82 14.55
AT5G63760.2 Thale cress nucleus 13.18 14.38
AT5G63730.1 Thale cress cytosol 14.4 14.03
Protein Annotations
Gene3D:1.20.120.1750MapMan:19.2.2.1.5.4.1Symbol:ARI4ArrayExpress:AT3G27720EnsemblPlantsGene:AT3G27720RefSeq:AT3G27720
TAIR:AT3G27720RefSeq:AT3G27720-TAIR-GEnsemblPlants:AT3G27720.1TAIR:AT3G27720.1Unigene:At.53522ncoils:Coil
InterPro:E3_UB_ligase_RBRGO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0005488GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538
GO:GO:0046872InterPro:IBR_domPFAM:PF01485PANTHER:PTHR11685PANTHER:PTHR11685:SF150SMART:SM00647
SUPFAM:SSF57850UniParc:UPI0000163582SEG:seg:::
Description
ARI4IBR domain containing protein [Source:TAIR;Acc:AT3G27720]
Coordinates
chr3:+:10271876..10273621
Molecular Weight (calculated)
57367.1 Da
IEP (calculated)
4.224
GRAVY (calculated)
-0.904
Length
493 amino acids
Sequence
(BLAST)
001: MDDEYMSLEE EEDNCYPSEF DDHDQMCSNA EESDLQHSRE PTSQVMEFLS VTENQARTLL IQYQWNVDKL FSVYTDQGKD VLFSRAEEEE GEDKEEEEGG
101: EDEEEEEGGE DEEAEEGGED EEAEEGVEDE EEEEDEKDDE VQLVSTELAE KFDRFLIESY VEDNNMVKWC PSTPHCGNAI RNIKDDGDVD EVECSCGLQF
201: CFSCLSESHS PCSCLMWKLW KKKCEDESET VNWMTVNTKL CPKCSKPIQK RDGCNHMTCK CGQHFCWLCG QATGRDHSYS SIAGHSCGRY KEEKVRQLER
301: AQRDLDRYTH YHYRYKAHID SLKLEDKLKK SILKKAVLNS ETKDQKVFKE YSWIIDAVNR LFRSRRILSY SYPFVFYMFG KELFKDDMSD EERNIKKNLF
401: EDQQQQLEGN VERLSKILEE PFDEYDHEKV VEMMRHLTNL TAVVDNLCKE MYECIENELL GPLISGIHNI APYRSKGIEQ AAEFSASSAC GSS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.