Factsheet for AT2G31760.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G31770.1	Thale cress	nucleus	82.1	77.72
AT2G31780.1	Thale cress	nucleus	64.98	75.39
CDY68344	Canola	nucleus	64.4	66.47
Bra021742.1-P	Field mustard	nucleus	64.2	66.27
CDY68345	Canola	cytosol	56.03	65.6
CDX79440	Canola	cytosol	21.4	64.33
CDX79439	Canola	nucleus	39.88	62.69
CDX84759	Canola	nucleus	62.84	62.0
Bra022865.1-P	Field mustard	nucleus	62.84	62.0
Bra005642.1-P	Field mustard	nucleus	60.51	60.98
CDY15373	Canola	nucleus	64.2	60.33
CDY42068	Canola	nucleus	53.11	59.74
CDY15374	Canola	nucleus	64.01	57.42
AT2G31510.1	Thale cress	nucleus	57.59	52.67
AT1G05890.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	58.75	50.84
CDY34512	Canola	cytosol, nucleus, plastid	28.99	50.68
Solyc06g073340.2.1	Tomato	nucleus	52.72	49.27
PGSC0003DMT400069483	Potato	nucleus	53.11	49.19
GSMUA_Achr9P07970_001	Banana	nucleus	52.72	49.09
Os04t0492100-01	Rice	nucleus	44.94	48.94
VIT_05s0102g00160.t01	Wine grape	nucleus	55.64	48.72
KRH24651	Soybean	nucleus	55.06	48.29
KRH23186	Soybean	nucleus	55.25	48.22
GSMUA_Achr6P28580_001	Banana	nucleus	52.53	48.21
KRH29654	Soybean	nucleus	54.67	47.95
KRH10154	Soybean	nucleus	54.86	47.88
AT1G65430.1	Thale cress	nucleus	52.33	47.44
Zm00001d003207_P001	Maize	nucleus	54.28	47.37
EES11042	Sorghum	nucleus	54.09	47.2
GSMUA_Achr8P28870_001	Banana	nucleus	53.7	47.02
TraesCS2B01G368000.2	Wheat	nucleus	53.7	46.86
TraesCS2D01G348000.2	Wheat	nucleus	53.7	46.86
TraesCS2A01G349600.1	Wheat	nucleus	53.7	46.86
Zm00001d025750_P011	Maize	extracellular	53.5	46.69
GSMUA_Achr3P16920_001	Banana	nucleus	53.11	46.51
HORVU6Hr1G055260.4	Barley	nucleus	53.11	46.35
TraesCS6B01G245900.2	Wheat	nucleus	52.92	46.34
TraesCS6A01G216900.1	Wheat	nucleus	52.92	46.18
TraesCS6D01G198600.5	Wheat	nucleus	52.92	46.18
Zm00001d046141_P001	Maize	cytosol	22.96	41.55
HORVU2Hr1G085060.3	Barley	cytosol	51.75	39.76
AT1G05880.2	Thale cress	cytosol	34.82	36.09
AT3G27710.1	Thale cress	nucleus	26.85	25.7
AT5G63750.1	Thale cress	nucleus	25.49	24.44
AT5G63760.2	Thale cress	nucleus	21.21	24.11
AT2G16090.1	Thale cress	nucleus	27.82	24.11
AT5G08730.1	Thale cress	cytosol	23.35	24.0
AT3G27720.1	Thale cress	nucleus	22.96	23.94
AT4G34370.1	Thale cress	nucleus	27.24	23.45
AT5G63730.1	Thale cress	cytosol	22.96	23.32

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	EntrezGene:817733	ProteinID:AAD32296.1	ProteinID:AEC08581.1
Symbol:ARI10	ArrayExpress:AT2G31760	EnsemblPlantsGene:AT2G31760	RefSeq:AT2G31760	TAIR:AT2G31760	RefSeq:AT2G31760-TAIR-G
EnsemblPlants:AT2G31760.1	TAIR:AT2G31760.1	Unigene:At.52998	ProteinID:CAD52892.1	EMBL:DQ056560	InterPro:E3_UB_ligase_RBR
GO:GO:0000151	GO:GO:0000209	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0031624	GO:GO:0032436	GO:GO:0042787	GO:GO:0046872	GO:GO:0061630
InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR013083	RefSeq:NP_180735.1	PFAM:PF01485	PO:PO:0000014
PO:PO:0000017	PO:PO:0005645	PO:PO:0006034	PO:PO:0020127	PFscan:PS50089	PANTHER:PTHR11685
PANTHER:PTHR11685:SF177	UniProt:Q9SKC4	SMART:SM00647	SUPFAM:SSF57850	UniParc:UPI000005E830	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

ARI10Probable E3 ubiquitin-protein ligase ARI10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC4]

Coordinates

chr2:+:13508493..13510390

Molecular Weight (calculated)

59450.8 Da

IEP (calculated)

4.802

GRAVY (calculated)

-0.549

Length

514 amino acids

Sequence
(BLAST)

001: MDYSDDDMID NESGEENNSD GGGNESYNYN AAVDTIILSE KSYVIIKEEE ILKLQRDDIE RVSTILFLSQ VEAIVLLLHY HWCVSKLEDE WFTDEERIRK
101: TVGILKEPVV DVNGTEVDIQ CGICFESYTR KEIASVSCGH PYCKTCWTGY ITTKIEDGPG CLRVKCPEPS CYAVVGQDMI DEVTEKKDKD KYYRYFLRSY
201: VEDGKKMKWC PSPGCECAVE FGESSGYDVA CLCSYRFCWN CSEDAHSPVD CETVSKWIFK NQDESENKNW ILANSKPCPK CKRPIEKSHG CNHMTCSASC
301: GHRFCWICGK SYSDHYACNN YVEDADHDKR TLLQSEIKRY THYYVRWVEN QSSRLKAMSD LEKFQSVQLK QLSDNQCKPK IDLQFIVDAW LQIIECRRVL
401: KWTYAYGYYL DNLAKRPLFE YLQGEAETGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTKVTK TYFDNLVKAL ENGLADVTKS SEESADFLET
501: QKLYDAYISE GCFF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.