Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P28580_001 | Banana | nucleus | 84.33 | 88.39 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 87.05 | 87.05 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 81.09 | 86.23 |
| Os04t0492100-01 | Rice | nucleus | 65.93 | 81.99 |
| EES11042 | Sorghum | nucleus | 80.24 | 79.97 |
| Zm00001d003207_P001 | Maize | nucleus | 79.73 | 79.46 |
| Zm00001d025750_P011 | Maize | extracellular | 79.56 | 79.29 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 79.39 | 79.12 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 79.39 | 79.12 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 79.22 | 78.95 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 78.02 | 78.02 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 77.85 | 77.59 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 77.68 | 77.42 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 77.51 | 77.25 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 76.66 | 76.66 |
| KRH23186 | Soybean | nucleus | 74.45 | 74.19 |
| KRH10154 | Soybean | nucleus | 74.45 | 74.19 |
| Solyc06g073340.2.1 | Tomato | nucleus | 68.82 | 73.45 |
| KRH29654 | Soybean | nucleus | 73.25 | 73.38 |
| Bra021726.1-P | Field mustard | nucleus | 62.52 | 73.11 |
| KRH24651 | Soybean | nucleus | 72.91 | 73.04 |
| PGSC0003DMT400069483 | Potato | nucleus | 68.82 | 72.79 |
| AT2G31510.1 | Thale cress | nucleus | 69.17 | 72.24 |
| Bra022845.1-P | Field mustard | nucleus | 67.46 | 71.61 |
| CDX84781 | Canola | nucleus | 67.46 | 71.48 |
| CDY15392 | Canola | nucleus | 67.29 | 70.92 |
| CDY19083 | Canola | nucleus | 66.78 | 70.63 |
| CDY23938 | Canola | nucleus | 66.61 | 70.2 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 61.16 | 70.12 |
| CDY47704 | Canola | nucleus | 65.93 | 69.35 |
| Bra015463.1-P | Field mustard | nucleus | 65.76 | 69.18 |
| CDY10162 | Canola | nucleus | 64.74 | 68.47 |
| CDX86547 | Canola | nucleus | 64.22 | 68.05 |
| CDY63791 | Canola | nucleus | 63.88 | 67.81 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 73.59 | 64.57 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 63.54 | 62.79 |
| CDY34490 | Canola | cytosol | 13.12 | 62.6 |
| CDX79440 | Canola | cytosol | 17.72 | 60.82 |
| CDY68344 | Canola | nucleus | 49.91 | 58.84 |
| Bra021742.1-P | Field mustard | nucleus | 49.57 | 58.43 |
| CDX70415 | Canola | nucleus | 51.79 | 57.9 |
| Bra023338.1-P | Field mustard | nucleus | 54.0 | 57.43 |
| CDX91196 | Canola | nucleus | 49.74 | 57.37 |
| Bra006112.1-P | Field mustard | nucleus | 51.96 | 57.12 |
| CDY68345 | Canola | cytosol | 42.59 | 56.95 |
| CDX78438 | Canola | nucleus | 47.87 | 56.77 |
| CDY61443 | Canola | nucleus | 52.13 | 56.67 |
| Bra005642.1-P | Field mustard | nucleus | 47.19 | 54.31 |
| CDX84759 | Canola | nucleus | 48.04 | 54.13 |
| Bra022865.1-P | Field mustard | nucleus | 48.04 | 54.13 |
| AT2G31780.1 | Thale cress | nucleus | 40.55 | 53.72 |
| AT2G31760.1 | Thale cress | nucleus | 47.02 | 53.7 |
| CDY42068 | Canola | nucleus | 41.23 | 52.95 |
| CDY15373 | Canola | nucleus | 49.23 | 52.83 |
| AT2G31770.1 | Thale cress | nucleus | 48.04 | 51.93 |
| CDY15374 | Canola | nucleus | 50.26 | 51.48 |
| CDX79439 | Canola | nucleus | 28.45 | 51.07 |
| Zm00001d046141_P001 | Maize | cytosol | 24.7 | 51.06 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 23.51 | 46.94 |
| GSMUA_Achr5P01850_001 | Banana | nucleus | 26.58 | 28.94 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 25.38 | 23.17 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:2.20.28.140 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr8G28870_001 |
| EnsemblPlants:GSMUA_Achr8P28870_001 | EnsemblPlants:GSMUA_Achr8T28870_001 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR001876 | InterPro:IPR013083 |
| UniProt:M0TUJ0 | PFAM:PF01485 | ScanProsite:PS01358 | PFscan:PS50089 | PFscan:PS50199 | PANTHER:PTHR11685 |
| PANTHER:PTHR11685:SF177 | SMART:SM00547 | SMART:SM00647 | SUPFAM:SSF57850 | SUPFAM:SSF90209 | UniParc:UPI0002967E79 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | SEG:seg | : |
Description
Probable E3 ubiquitin-protein ligase ARI7 [Source:GMGC_GENE;Acc:GSMUA_Achr8G28870_001]
Coordinates
chr8:+:31497932..31512396
Molecular Weight (calculated)
67007.8 Da
IEP (calculated)
5.012
GRAVY (calculated)
-0.707
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEDDMHDA NDLESVEDDF YSGDTGMGSD DGDAHYDFGD NESDDSDDIT SRQQQNYTIL SEADIRQHQE EDISRVSTVL SIPRYAACIL LRHYNWSISR
101: VHDEWFADEE RVRKVVGLLE KPVEMPNARE LTCGICFENY PRDCMNSASC GHPFCWACWR GYISTSISDG PGCLMLRCPD PSCSAAVGQN IVELLATDED
201: KEKYSRYLLR SYVEDNRKIK WCPAPGCEFA VEFVIGSGNY DICCSCSYNF CWNCTEEAHR PVDCVTVAKW ILKNSAESEN MNWILANSKP CPKCKRPIEK
301: NQGCMHITCT PPCKFEFCWL CLGSWSEHGE RTGGFYACNR YEAAKQEGAY DESERRREMA KNSLERYTHY YERWATNQSS RQKALADLHS MQNEKLEKLS
401: DRQSQPESQL KFIIEAWLQI VECRRVLKWT YAYGYYLPEH EHSKRQFFEY LQGEAESGLE RLHQCAEKEL QVYLDAESPM KDFNDFRTKL AGLTSVTRNY
501: FEHLVQALET GLEDVGSSNS QATCSKSSSS KILGNKSKNG KIKPAGTSSA AGAPSRSMDD GNLWSCDHCT FANPKSTNTC HMCEHHR
101: VHDEWFADEE RVRKVVGLLE KPVEMPNARE LTCGICFENY PRDCMNSASC GHPFCWACWR GYISTSISDG PGCLMLRCPD PSCSAAVGQN IVELLATDED
201: KEKYSRYLLR SYVEDNRKIK WCPAPGCEFA VEFVIGSGNY DICCSCSYNF CWNCTEEAHR PVDCVTVAKW ILKNSAESEN MNWILANSKP CPKCKRPIEK
301: NQGCMHITCT PPCKFEFCWL CLGSWSEHGE RTGGFYACNR YEAAKQEGAY DESERRREMA KNSLERYTHY YERWATNQSS RQKALADLHS MQNEKLEKLS
401: DRQSQPESQL KFIIEAWLQI VECRRVLKWT YAYGYYLPEH EHSKRQFFEY LQGEAESGLE RLHQCAEKEL QVYLDAESPM KDFNDFRTKL AGLTSVTRNY
501: FEHLVQALET GLEDVGSSNS QATCSKSSSS KILGNKSKNG KIKPAGTSSA AGAPSRSMDD GNLWSCDHCT FANPKSTNTC HMCEHHR
001: MEADDDFYSG TENYSDYADS DEDDADGEYE FVDDAADDSD DLIFRRRQQN YSVLSEADIC KLQEDDISRI STVLSISRNS SAILLRHYNW CVSRVHDEWF
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR
Arabidopsis Description
ARI8ATARI8 [Source:UniProtKB/TrEMBL;Acc:A0A178WLP2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.