Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006112.1-P | Field mustard | nucleus | 98.79 | 91.57 |
| CDX70415 | Canola | nucleus | 93.94 | 88.57 |
| CDX91196 | Canola | nucleus | 65.45 | 63.65 |
| CDY10162 | Canola | nucleus | 65.25 | 58.2 |
| CDY63791 | Canola | nucleus | 64.85 | 58.05 |
| CDY61443 | Canola | nucleus | 63.23 | 57.96 |
| CDY47704 | Canola | nucleus | 65.25 | 57.89 |
| CDX86547 | Canola | nucleus | 64.65 | 57.76 |
| CDX84781 | Canola | nucleus | 62.22 | 55.6 |
| CDY19083 | Canola | nucleus | 61.82 | 55.14 |
| CDY15392 | Canola | nucleus | 61.62 | 54.76 |
| CDY23938 | Canola | nucleus | 61.41 | 54.58 |
| CDX79440 | Canola | cytosol | 18.59 | 53.8 |
| CDY68344 | Canola | nucleus | 53.94 | 53.61 |
| Solyc06g073340.2.1 | Tomato | nucleus | 59.39 | 53.45 |
| PGSC0003DMT400069483 | Potato | nucleus | 58.99 | 52.61 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 59.8 | 50.43 |
| CDY68345 | Canola | cytosol | 44.65 | 50.34 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 55.56 | 49.82 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 29.49 | 49.66 |
| KRH10154 | Soybean | nucleus | 58.79 | 49.41 |
| KRH23186 | Soybean | nucleus | 58.59 | 49.24 |
| CDY16406 | Canola | nucleus | 54.14 | 48.99 |
| Os04t0492100-01 | Rice | nucleus | 46.67 | 48.94 |
| Zm00001d003207_P001 | Maize | nucleus | 58.18 | 48.9 |
| EES11042 | Sorghum | nucleus | 57.98 | 48.73 |
| KRH29654 | Soybean | nucleus | 57.58 | 48.63 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 54.95 | 48.57 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 57.78 | 48.56 |
| KRH24651 | Soybean | nucleus | 57.37 | 48.46 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 57.58 | 48.39 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 57.58 | 48.39 |
| CDY57807 | Canola | nucleus | 54.95 | 48.23 |
| Zm00001d025750_P011 | Maize | extracellular | 57.37 | 48.22 |
| CDX84759 | Canola | nucleus | 50.51 | 47.98 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 56.77 | 47.87 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 56.77 | 47.87 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 56.77 | 47.71 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 56.77 | 47.71 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 56.77 | 47.71 |
| CDY15373 | Canola | nucleus | 52.53 | 47.53 |
| CDY42068 | Canola | nucleus | 43.64 | 47.26 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 55.76 | 47.02 |
| CDY15374 | Canola | nucleus | 52.12 | 45.03 |
| CDX79439 | Canola | nucleus | 29.49 | 44.65 |
| CDY34490 | Canola | cytosol | 10.1 | 40.65 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 54.34 | 40.21 |
| Zm00001d046141_P001 | Maize | cytosol | 19.8 | 34.51 |
| CDY10159 | Canola | cytosol | 34.75 | 32.58 |
| CDY47702 | Canola | cytosol | 33.54 | 31.86 |
| CDX99146 | Canola | nucleus | 25.86 | 28.7 |
| CDX99147 | Canola | nucleus | 19.39 | 27.12 |
| CDY00148 | Canola | nucleus | 25.45 | 26.03 |
| CDX84438 | Canola | cytosol | 18.18 | 24.46 |
| CDY20037 | Canola | nucleus | 25.05 | 23.66 |
| CDY44786 | Canola | nucleus | 23.03 | 23.65 |
| CDY31353 | Canola | nucleus | 21.01 | 23.37 |
| CDY49559 | Canola | nucleus | 27.47 | 23.37 |
| CDX71262 | Canola | nucleus | 27.27 | 23.24 |
| CDY40734 | Canola | nucleus | 22.22 | 23.06 |
| CDY03991 | Canola | nucleus | 22.42 | 22.93 |
| CDY49768 | Canola | nucleus | 22.22 | 22.92 |
| CDY39850 | Canola | nucleus | 20.61 | 22.87 |
| CDX75425 | Canola | nucleus | 26.26 | 22.0 |
| CDY41533 | Canola | nucleus | 23.23 | 21.66 |
| CDX69049 | Canola | nucleus | 26.06 | 21.61 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 24.24 | 17.88 |
| CDY41534 | Canola | nucleus | 6.67 | 17.84 |
| CDY21562 | Canola | nucleus | 23.84 | 17.77 |
| CDX84439 | Canola | nucleus | 22.42 | 16.92 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078CTF0 | EnsemblPlants:CDX78438 | ProteinID:CDX78438 |
| ProteinID:CDX78438.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00129825001 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS00518 |
| PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00184 | SMART:SM00647 | SUPFAM:SSF57850 |
| UniPathway:UPA00143 | UniParc:UPI0004EE507F | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
BnaA03g03500D
Coordinates
chrLK031815:-:796071..797675
Molecular Weight (calculated)
56700.2 Da
IEP (calculated)
4.779
GRAVY (calculated)
-0.614
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDDYYMES GEEDLYSDGA DDYNDGADHD DDTDDTGFLG DDDVDSSMIS SPRSHMNYVV LKEEDIRRQQ ESDIAQVSMI LSLSKVEASV LLLHYHWNVG
101: KVNDEWFADE RRVRTSAGLE GGPVIVPYSE GGKVACGICF DYFCRIDIVP IMCGHAFCST CWTTKDKYDR YFLRSYVEEN KKTKWCPAPG CEHAIEFSAT
201: GTGSSYDVSC LCSHSFCWNC TQDAHRPVDC DRVSQWIRKN SVEAENTKWI LDNSKPCPKC KRPIEKNRGC MHMSCTPPCR HQFCWLCLGA WSEHGEGTGG
301: PYTCNRYSKA KGQGLHDEAE MKREMAKHSL EKYTHYYERW AGNQTSRQKA IGDLEKFLSV DVMKLSDKQC IPETELGFIT DAWLQIIECR RVLKWTYAYG
401: YYLLESEQEK RQFFEYMQGE AESGLERLHK CVELESEVFQ YPEDTPKQDF KGFRTKLTTL TSVTKTHFET LVKALENDLS DVGFASDVEV TTLAL
101: KVNDEWFADE RRVRTSAGLE GGPVIVPYSE GGKVACGICF DYFCRIDIVP IMCGHAFCST CWTTKDKYDR YFLRSYVEEN KKTKWCPAPG CEHAIEFSAT
201: GTGSSYDVSC LCSHSFCWNC TQDAHRPVDC DRVSQWIRKN SVEAENTKWI LDNSKPCPKC KRPIEKNRGC MHMSCTPPCR HQFCWLCLGA WSEHGEGTGG
301: PYTCNRYSKA KGQGLHDEAE MKREMAKHSL EKYTHYYERW AGNQTSRQKA IGDLEKFLSV DVMKLSDKQC IPETELGFIT DAWLQIIECR RVLKWTYAYG
401: YYLLESEQEK RQFFEYMQGE AESGLERLHK CVELESEVFQ YPEDTPKQDF KGFRTKLTTL TSVTKTHFET LVKALENDLS DVGFASDVEV TTLAL
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.