Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49768 | Canola | nucleus | 94.21 | 95.0 |
| CDY00148 | Canola | nucleus | 66.74 | 66.74 |
| CDY20037 | Canola | nucleus | 71.49 | 66.03 |
| AT3G27710.1 | Thale cress | nucleus | 63.02 | 56.8 |
| AT3G27720.1 | Thale cress | nucleus | 54.96 | 53.96 |
| CDX75425 | Canola | nucleus | 61.98 | 50.76 |
| CDX69049 | Canola | nucleus | 62.19 | 50.42 |
| CDY49559 | Canola | nucleus | 59.92 | 49.83 |
| CDX71262 | Canola | nucleus | 59.09 | 49.23 |
| KRH24517 | Soybean | nucleus | 57.02 | 47.59 |
| PGSC0003DMT400043486 | Potato | cytosol | 51.03 | 47.41 |
| KRH29521 | Soybean | nucleus | 56.61 | 47.24 |
| Solyc04g079780.2.1 | Tomato | cytosol | 50.83 | 47.13 |
| VIT_03s0063g02000.t01 | Wine grape | nucleus | 56.2 | 46.18 |
| Solyc01g109280.2.1 | Tomato | nucleus | 56.2 | 46.1 |
| PGSC0003DMT400064832 | Potato | nucleus | 55.79 | 45.76 |
| VIT_18s0001g11740.t01 | Wine grape | cytosol | 52.07 | 45.41 |
| Solyc12g089000.1.1 | Tomato | nucleus | 50.21 | 45.25 |
| PGSC0003DMT400039948 | Potato | nucleus | 50.41 | 44.94 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 53.31 | 41.61 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 53.31 | 41.61 |
| EER92613 | Sorghum | nucleus | 51.86 | 41.56 |
| TraesCS4B01G236900.1 | Wheat | nucleus | 52.89 | 41.29 |
| Os03t0233500-01 | Rice | nucleus | 51.86 | 41.01 |
| HORVU4Hr1G066180.1 | Barley | nucleus | 52.48 | 40.97 |
| Zm00001d028285_P003 | Maize | nucleus | 51.65 | 40.32 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 53.31 | 40.12 |
| GSMUA_Achr5P01850_001 | Banana | nucleus | 44.01 | 39.52 |
| HORVU1Hr1G018020.1 | Barley | cytosol | 14.05 | 36.96 |
| TraesCS4B01G071700.1 | Wheat | nucleus | 40.29 | 36.04 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 39.26 | 35.58 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 39.46 | 35.5 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 40.08 | 35.4 |
| TraesCS4B01G071800.1 | Wheat | nucleus | 39.46 | 34.79 |
| Zm00001d013716_P002 | Maize | nucleus | 37.81 | 34.27 |
| Os03t0625800-01 | Rice | cytosol | 38.02 | 34.07 |
| EER93790 | Sorghum | nucleus | 37.4 | 33.39 |
| EER93787 | Sorghum | nucleus | 36.78 | 33.27 |
| HORVU4Hr1G011770.1 | Barley | nucleus | 36.57 | 32.96 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 36.36 | 32.96 |
| Zm00001d048017_P003 | Maize | nucleus | 51.86 | 32.81 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 35.95 | 32.46 |
| TraesCS4B01G070800.1 | Wheat | nucleus | 35.33 | 31.9 |
| HORVU7Hr1G068450.2 | Barley | nucleus | 16.74 | 31.64 |
| Os03t0625933-00 | Rice | nucleus | 21.49 | 31.61 |
| HORVU4Hr1G011910.1 | Barley | cytosol, plastid | 39.05 | 30.88 |
| Os03t0626100-01 | Rice | nucleus | 33.88 | 28.77 |
| CDX79439 | Canola | nucleus | 16.94 | 25.08 |
| CDY68344 | Canola | nucleus | 23.76 | 23.09 |
| CDY68345 | Canola | cytosol | 20.87 | 23.01 |
| CDX70415 | Canola | nucleus | 24.79 | 22.86 |
| CDX84781 | Canola | nucleus | 25.83 | 22.56 |
| CDX84759 | Canola | nucleus | 24.17 | 22.46 |
| CDY23938 | Canola | nucleus | 25.83 | 22.44 |
| CDX78438 | Canola | nucleus | 22.93 | 22.42 |
| CDY63791 | Canola | nucleus | 25.41 | 22.24 |
| CDX86547 | Canola | nucleus | 25.41 | 22.2 |
| CDX91196 | Canola | nucleus | 22.93 | 21.81 |
| CDY10162 | Canola | nucleus | 25.0 | 21.8 |
| CDY19083 | Canola | nucleus | 25.0 | 21.8 |
| CDY47704 | Canola | nucleus | 25.0 | 21.68 |
| CDY15392 | Canola | nucleus | 24.79 | 21.54 |
| CDY61443 | Canola | nucleus | 23.97 | 21.48 |
| CDX99147 | Canola | nucleus | 15.7 | 21.47 |
| CDY16406 | Canola | nucleus | 23.97 | 21.21 |
| CDY15373 | Canola | nucleus | 23.55 | 20.84 |
| CDY57807 | Canola | nucleus | 24.17 | 20.74 |
| CDY42068 | Canola | nucleus | 18.59 | 19.69 |
| CDY15374 | Canola | nucleus | 23.14 | 19.55 |
| CDX99146 | Canola | nucleus | 17.15 | 18.61 |
| CDY47702 | Canola | cytosol | 19.42 | 18.04 |
| CDY10159 | Canola | cytosol | 18.8 | 17.23 |
| CDX84438 | Canola | cytosol | 13.02 | 17.12 |
| CDY41533 | Canola | nucleus | 17.98 | 16.38 |
| CDY40734 | Canola | nucleus | 15.7 | 15.93 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 9.5 | 15.65 |
| CDY34490 | Canola | cytosol | 3.93 | 15.45 |
| CDY44786 | Canola | nucleus | 14.88 | 14.94 |
| CDY39850 | Canola | nucleus | 13.43 | 14.57 |
| CDY31353 | Canola | nucleus | 12.81 | 13.93 |
| CDY21562 | Canola | nucleus | 18.8 | 13.7 |
| CDX84439 | Canola | nucleus | 17.98 | 13.26 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 17.98 | 12.97 |
| CDX79440 | Canola | cytosol | 4.55 | 12.87 |
| CDY41534 | Canola | nucleus | 3.72 | 9.73 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078ERV4 | EnsemblPlants:CDY03991 | ProteinID:CDY03991 |
| ProteinID:CDY03991.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00117532001 | InterPro:IBR_dom | InterPro:IPR013083 | PFAM:PF01485 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF150 |
| SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE2F73 | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaC02g37060D
Coordinates
chrLK031948:+:183396..184979
Molecular Weight (calculated)
55774.5 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.599
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDYMSYEE EEEEEEDYDC FDHDQEDYYE EPELQGVSSK KSTVMESLSV KESQARTLLI HYQWNVDNLF AVYIERGKDS LFKSADDLPS QAMTGMECGH
101: SFCNDCWKEH FTIKINEGQS KRIACMAHKC NAICDVDVVR TLVCAELAEK FDRFLVESYV DDNKLLKWCP STPHCGNAIR KVLDDGGEVE CSCGHQFCFN
201: CLGESHSPCS CLMWKLWTKK CEDESESVTW LTIHTRMCPK CSKPVHKTVG CNLVTCICGQ YFCWLCGGAT GSAHTWTSIS GHDCGRYKED KVRQTERAKR
301: DSDRYAHYLH QYKSHTDSSK QEDELRKIVR ERAALVTLKT KDSAFKTMDW AINGADLLFR SRKILSKSYP FAFYMFGEEL FKDEMSDEDR EIKKNLFENQ
401: QQQLTGNIET LSEILNVSFD EYSSDELKKM RGETRDIGLV VNKVCKLMYE CIENDLLGTT QDGINHSISP YRSEGIEKAV EFLC
101: SFCNDCWKEH FTIKINEGQS KRIACMAHKC NAICDVDVVR TLVCAELAEK FDRFLVESYV DDNKLLKWCP STPHCGNAIR KVLDDGGEVE CSCGHQFCFN
201: CLGESHSPCS CLMWKLWTKK CEDESESVTW LTIHTRMCPK CSKPVHKTVG CNLVTCICGQ YFCWLCGGAT GSAHTWTSIS GHDCGRYKED KVRQTERAKR
301: DSDRYAHYLH QYKSHTDSSK QEDELRKIVR ERAALVTLKT KDSAFKTMDW AINGADLLFR SRKILSKSYP FAFYMFGEEL FKDEMSDEDR EIKKNLFENQ
401: QQQLTGNIET LSEILNVSFD EYSSDELKKM RGETRDIGLV VNKVCKLMYE CIENDLLGTT QDGINHSISP YRSEGIEKAV EFLC
001: MDDNLSGEEE DYYYSSDQES LNGIDNDESV SIPVSSRSNT VKVITKESLL AAQREDLRRV MELLSVKEHH ARTLLIHYRW DVEKLFAVLV EKGKDSLFSG
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
Arabidopsis Description
ARI2Probable E3 ubiquitin-protein ligase ARI2 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.