Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G068450.2 | Barley | nucleus | 79.89 | 57.42 |
| HORVU4Hr1G066180.1 | Barley | nucleus | 80.98 | 24.03 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 79.89 | 23.71 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 79.35 | 23.55 |
| TraesCS4B01G236900.1 | Wheat | nucleus | 79.35 | 23.55 |
| Os03t0233500-01 | Rice | nucleus | 77.72 | 23.37 |
| Zm00001d028285_P003 | Maize | nucleus | 77.17 | 22.9 |
| EER92613 | Sorghum | nucleus | 75.0 | 22.85 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 70.65 | 20.22 |
| Zm00001d048017_P003 | Maize | nucleus | 78.26 | 18.82 |
| KRH24517 | Soybean | nucleus | 57.07 | 18.1 |
| KRH29521 | Soybean | nucleus | 56.52 | 17.93 |
| AT2G16090.1 | Thale cress | nucleus | 57.61 | 17.88 |
| AT3G27720.1 | Thale cress | nucleus | 47.83 | 17.85 |
| CDY49559 | Canola | nucleus | 55.43 | 17.53 |
| Bra001960.1-P | Field mustard | nucleus | 55.43 | 17.53 |
| AT4G34370.1 | Thale cress | nucleus | 56.52 | 17.42 |
| Bra011524.1-P | Field mustard | nucleus | 55.43 | 17.26 |
| CDX75425 | Canola | nucleus | 55.43 | 17.26 |
| CDX71262 | Canola | nucleus | 54.35 | 17.21 |
| CDX69049 | Canola | nucleus | 55.43 | 17.09 |
| VIT_03s0063g02000.t01 | Wine grape | nucleus | 54.35 | 16.98 |
| PGSC0003DMT400064832 | Potato | nucleus | 53.26 | 16.61 |
| Solyc01g109280.2.1 | Tomato | nucleus | 52.17 | 16.27 |
| AT3G27710.1 | Thale cress | nucleus | 47.28 | 16.2 |
| VIT_18s0001g11740.t01 | Wine grape | cytosol | 47.28 | 15.68 |
| PGSC0003DMT400043486 | Potato | cytosol | 42.93 | 15.16 |
| Solyc04g079780.2.1 | Tomato | cytosol | 41.85 | 14.75 |
| CDY49768 | Canola | nucleus | 36.96 | 14.17 |
| CDY00148 | Canola | nucleus | 36.96 | 14.05 |
| CDY03991 | Canola | nucleus | 36.96 | 14.05 |
| PGSC0003DMT400039948 | Potato | nucleus | 40.76 | 13.81 |
| Solyc12g089000.1.1 | Tomato | nucleus | 39.13 | 13.41 |
| Bra033024.1-P | Field mustard | nucleus | 37.5 | 13.12 |
| Bra039068.1-P | Field mustard | nucleus | 36.96 | 12.98 |
| CDY20037 | Canola | nucleus | 36.96 | 12.98 |
| HORVU4Hr1G011910.1 | Barley | cytosol, plastid | 32.07 | 9.64 |
| HORVU4Hr1G011770.1 | Barley | nucleus | 27.72 | 9.5 |
| HORVU5Hr1G089940.1 | Barley | cytosol | 15.22 | 8.41 |
| HORVU3Hr1G049680.1 | Barley | nucleus | 14.13 | 7.16 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 17.39 | 5.43 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 17.93 | 4.93 |
| HORVU5Hr1G089020.2 | Barley | nucleus | 15.22 | 4.62 |
| HORVU7Hr1G056040.5 | Barley | nucleus, plastid | 16.3 | 4.52 |
| HORVU5Hr1G078470.2 | Barley | nucleus | 11.96 | 3.94 |
| HORVU7Hr1G056020.3 | Barley | cytosol | 3.26 | 2.13 |
| HORVU3Hr1G019640.1 | Barley | cytosol, peroxisome, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G018020.1 | EnsemblPlantsGene:HORVU1Hr1G018020 | Gene3D:1.20.120.1750 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:E3_UB_ligase_RBR | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF150 | UniParc:UPI000B4742D1 | UniProt:A0A287ESC8 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:63947104..63948559
Molecular Weight (calculated)
22059.5 Da
IEP (calculated)
7.179
GRAVY (calculated)
-0.439
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYHNRYKAH TDSLMQEAKL KRDIQWKISI SENNDSKIKD YSWVINGLNR LFRSRRVLSY SYPFAFYMFG DEIFKDEMTP EERELKQNLF EDQQQQLEFN
101: VERLSGFLEK DFQNFSDEEV MDTMKHVINL SNVVDRLCKQ IALRMICCTL SACLIIFPHT NLRVSIEHQS SILVWTLLNK VRHL
101: VERLSGFLEK DFQNFSDEEV MDTMKHVINL SNVVDRLCKQ IALRMICCTL SACLIIFPHT NLRVSIEHQS SILVWTLLNK VRHL
001: MDDNLSGEEE DYYYSSDQES LNGIDNDESV SIPVSSRSNT VKVITKESLL AAQREDLRRV MELLSVKEHH ARTLLIHYRW DVEKLFAVLV EKGKDSLFSG
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
Arabidopsis Description
ARI2Probable E3 ubiquitin-protein ligase ARI2 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.