Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03991 | Canola | nucleus | 95.0 | 94.21 |
| Bra033024.1-P | Field mustard | nucleus | 99.79 | 91.06 |
| CDY00148 | Canola | nucleus | 67.08 | 66.53 |
| CDY20037 | Canola | nucleus | 71.25 | 65.27 |
| AT3G27710.1 | Thale cress | nucleus | 63.33 | 56.61 |
| AT3G27720.1 | Thale cress | nucleus | 55.42 | 53.96 |
| CDX75425 | Canola | nucleus | 62.29 | 50.59 |
| CDY49559 | Canola | nucleus | 61.04 | 50.34 |
| CDX69049 | Canola | nucleus | 62.5 | 50.25 |
| CDX71262 | Canola | nucleus | 60.21 | 49.74 |
| KRH24517 | Soybean | nucleus | 58.12 | 48.1 |
| PGSC0003DMT400043486 | Potato | cytosol | 52.08 | 47.98 |
| KRH29521 | Soybean | nucleus | 57.92 | 47.93 |
| Solyc04g079780.2.1 | Tomato | cytosol | 52.08 | 47.89 |
| VIT_03s0063g02000.t01 | Wine grape | nucleus | 57.92 | 47.2 |
| Solyc01g109280.2.1 | Tomato | nucleus | 57.71 | 46.95 |
| PGSC0003DMT400064832 | Potato | nucleus | 57.29 | 46.61 |
| Solyc12g089000.1.1 | Tomato | nucleus | 51.04 | 45.62 |
| VIT_18s0001g11740.t01 | Wine grape | cytosol | 52.71 | 45.59 |
| PGSC0003DMT400039948 | Potato | nucleus | 51.04 | 45.12 |
| EER92613 | Sorghum | nucleus | 52.71 | 41.89 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 53.75 | 41.61 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 53.75 | 41.61 |
| TraesCS4B01G236900.1 | Wheat | nucleus | 53.54 | 41.45 |
| Os03t0233500-01 | Rice | nucleus | 52.5 | 41.18 |
| HORVU4Hr1G066180.1 | Barley | nucleus | 53.12 | 41.13 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 54.58 | 40.75 |
| Zm00001d028285_P003 | Maize | nucleus | 52.08 | 40.32 |
| GSMUA_Achr5P01850_001 | Banana | nucleus | 44.58 | 39.7 |
| HORVU1Hr1G018020.1 | Barley | cytosol | 14.17 | 36.96 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 40.21 | 35.87 |
| TraesCS4B01G071700.1 | Wheat | nucleus | 40.42 | 35.86 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 40.62 | 35.58 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 39.17 | 35.21 |
| TraesCS4B01G071800.1 | Wheat | nucleus | 40.0 | 34.97 |
| Zm00001d013716_P002 | Maize | nucleus | 38.54 | 34.64 |
| Os03t0625800-01 | Rice | cytosol | 38.96 | 34.63 |
| EER93790 | Sorghum | nucleus | 38.33 | 33.95 |
| HORVU4Hr1G011770.1 | Barley | nucleus | 37.92 | 33.89 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 37.5 | 33.71 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 37.29 | 33.4 |
| EER93787 | Sorghum | nucleus | 36.88 | 33.08 |
| TraesCS4B01G070800.1 | Wheat | nucleus | 36.67 | 32.84 |
| Zm00001d048017_P003 | Maize | nucleus | 52.29 | 32.81 |
| HORVU7Hr1G068450.2 | Barley | nucleus | 16.88 | 31.64 |
| Os03t0625933-00 | Rice | nucleus | 21.46 | 31.31 |
| HORVU4Hr1G011910.1 | Barley | cytosol, plastid | 39.79 | 31.21 |
| Os03t0626100-01 | Rice | nucleus | 33.96 | 28.6 |
| CDX79439 | Canola | nucleus | 17.08 | 25.08 |
| CDY68345 | Canola | cytosol | 21.46 | 23.46 |
| CDY68344 | Canola | nucleus | 24.17 | 23.29 |
| CDX70415 | Canola | nucleus | 24.79 | 22.67 |
| CDY63791 | Canola | nucleus | 26.04 | 22.6 |
| CDX86547 | Canola | nucleus | 26.04 | 22.56 |
| CDX84759 | Canola | nucleus | 24.38 | 22.46 |
| CDX84781 | Canola | nucleus | 25.83 | 22.38 |
| CDY23938 | Canola | nucleus | 25.83 | 22.26 |
| CDX78438 | Canola | nucleus | 22.92 | 22.22 |
| CDY10162 | Canola | nucleus | 25.62 | 22.16 |
| CDY47704 | Canola | nucleus | 25.62 | 22.04 |
| CDY61443 | Canola | nucleus | 24.79 | 22.04 |
| CDX91196 | Canola | nucleus | 23.12 | 21.81 |
| CDX99147 | Canola | nucleus | 16.04 | 21.75 |
| CDY19083 | Canola | nucleus | 25.0 | 21.62 |
| CDY15392 | Canola | nucleus | 24.79 | 21.36 |
| CDY15373 | Canola | nucleus | 23.75 | 20.84 |
| CDY16406 | Canola | nucleus | 23.75 | 20.84 |
| CDY57807 | Canola | nucleus | 23.96 | 20.39 |
| CDY42068 | Canola | nucleus | 18.96 | 19.91 |
| CDY15374 | Canola | nucleus | 23.54 | 19.72 |
| CDX99146 | Canola | nucleus | 17.5 | 18.83 |
| CDY47702 | Canola | cytosol | 19.58 | 18.04 |
| CDY10159 | Canola | cytosol | 18.96 | 17.23 |
| CDX84438 | Canola | cytosol | 13.12 | 17.12 |
| CDY41533 | Canola | nucleus | 18.33 | 16.57 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 9.79 | 15.99 |
| CDY40734 | Canola | nucleus | 15.83 | 15.93 |
| CDY34490 | Canola | cytosol | 3.96 | 15.45 |
| CDY44786 | Canola | nucleus | 15.0 | 14.94 |
| CDY39850 | Canola | nucleus | 13.54 | 14.57 |
| CDX79440 | Canola | cytosol | 5.0 | 14.04 |
| CDY21562 | Canola | nucleus | 19.38 | 14.01 |
| CDY31353 | Canola | nucleus | 12.92 | 13.93 |
| CDX84439 | Canola | nucleus | 18.12 | 13.26 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 18.12 | 12.97 |
| CDY41534 | Canola | nucleus | 3.54 | 9.19 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078IL10 | UniProt:A0A078IL10 | EnsemblPlants:CDY49768 |
| ProteinID:CDY49768 | ProteinID:CDY49768.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00093770001 | InterPro:IBR_dom | InterPro:IPR013083 |
| PFAM:PF01485 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF150 | SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 |
| UniParc:UPI0004EF0F2F | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
BnaA02g29030DBnaA02g29030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IL10]
Coordinates
chrLK032857:-:82499..84070
Molecular Weight (calculated)
55364.0 Da
IEP (calculated)
5.145
GRAVY (calculated)
-0.639
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDYMSYEE EEDYDSFDQY QEDYYEEPEL QRVSSKNSTV MESLSVKESQ ARTLLIHYQW NVDNLFAVYI ERGKESLFKS ADDLPSHAMT GMECGHSFCN
101: DCWKEHFTIK INEGQSKRIA CMAHKCNAIC DADAVRTLVC PELAEKFDRF LVESYVDDNK LVKWCPSTPH CGNAIRKVDD DGGEVECSCG HQFCFTCLGE
201: SHSPCSCLMW KLWTKKCEDE SESVTWLTIH TRMCPKCSKP VHKTVGCNLV TCICGQYFCW LCGGATGRDH TWTSISGHDC GRYKEDKVRQ TERANRDSDR
301: YAHYLHQYKS HTDSSKQEDE LRKIVREKAA LVTSKTKDST FKTMDWAVNG ADLLFRSRKI LSKSYPFAFY MFGEELFKDK MSDEDREIKK NLFENQQQQL
401: TGNIETLSKI LNVSFDEYSS DELKKMRGET RDIGLVVDKV CKLMYECIEN DLLGTAQDGI NHSISPYRSE GIEKAVEFLC
101: DCWKEHFTIK INEGQSKRIA CMAHKCNAIC DADAVRTLVC PELAEKFDRF LVESYVDDNK LVKWCPSTPH CGNAIRKVDD DGGEVECSCG HQFCFTCLGE
201: SHSPCSCLMW KLWTKKCEDE SESVTWLTIH TRMCPKCSKP VHKTVGCNLV TCICGQYFCW LCGGATGRDH TWTSISGHDC GRYKEDKVRQ TERANRDSDR
301: YAHYLHQYKS HTDSSKQEDE LRKIVREKAA LVTSKTKDST FKTMDWAVNG ADLLFRSRKI LSKSYPFAFY MFGEELFKDK MSDEDREIKK NLFENQQQQL
401: TGNIETLSKI LNVSFDEYSS DELKKMRGET RDIGLVVDKV CKLMYECIEN DLLGTAQDGI NHSISPYRSE GIEKAVEFLC
001: MDDNLSGEEE DYYYSSDQES LNGIDNDESV SIPVSSRSNT VKVITKESLL AAQREDLRRV MELLSVKEHH ARTLLIHYRW DVEKLFAVLV EKGKDSLFSG
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
Arabidopsis Description
ARI2Probable E3 ubiquitin-protein ligase ARI2 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.