Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79440 | Canola | cytosol | 41.46 | 29.82 |
| CDX84781 | Canola | nucleus | 78.86 | 17.51 |
| CDY15392 | Canola | nucleus | 78.86 | 17.41 |
| CDY19083 | Canola | nucleus | 78.05 | 17.3 |
| CDY23938 | Canola | nucleus | 77.24 | 17.06 |
| AT2G31510.1 | Thale cress | nucleus | 77.24 | 16.9 |
| Os04t0492100-01 | Rice | nucleus | 61.79 | 16.1 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 37.4 | 15.65 |
| CDY47704 | Canola | nucleus | 66.67 | 14.7 |
| Solyc06g073340.2.1 | Tomato | nucleus | 64.23 | 14.36 |
| KRH10154 | Soybean | nucleus | 68.29 | 14.26 |
| KRH23186 | Soybean | nucleus | 68.29 | 14.26 |
| PGSC0003DMT400069483 | Potato | nucleus | 64.23 | 14.23 |
| CDY63791 | Canola | nucleus | 63.41 | 14.1 |
| CDX86547 | Canola | nucleus | 63.41 | 14.08 |
| CDY68345 | Canola | cytosol | 49.59 | 13.9 |
| CDY10162 | Canola | nucleus | 62.6 | 13.87 |
| KRH29654 | Soybean | nucleus | 63.41 | 13.31 |
| Zm00001d003207_P001 | Maize | nucleus | 63.41 | 13.24 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 62.6 | 13.12 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 62.6 | 13.12 |
| Zm00001d025750_P011 | Maize | extracellular | 62.6 | 13.07 |
| EES11042 | Sorghum | nucleus | 62.6 | 13.07 |
| KRH24651 | Soybean | nucleus | 61.79 | 12.97 |
| CDY57807 | Canola | nucleus | 58.54 | 12.77 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 60.98 | 12.73 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 60.98 | 12.73 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 60.98 | 12.73 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 57.72 | 12.68 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 60.16 | 12.56 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 59.35 | 12.44 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 59.35 | 12.44 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 59.35 | 12.39 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 59.35 | 12.39 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 55.28 | 12.32 |
| CDX84759 | Canola | nucleus | 51.22 | 12.09 |
| CDY42068 | Canola | nucleus | 43.9 | 11.82 |
| CDY68344 | Canola | nucleus | 47.15 | 11.65 |
| CDY16406 | Canola | nucleus | 51.22 | 11.52 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 61.79 | 11.36 |
| Zm00001d046141_P001 | Maize | cytosol | 25.2 | 10.92 |
| CDX70415 | Canola | nucleus | 45.53 | 10.67 |
| CDY15374 | Canola | nucleus | 49.59 | 10.65 |
| CDY15373 | Canola | nucleus | 47.15 | 10.6 |
| CDX78438 | Canola | nucleus | 40.65 | 10.1 |
| CDX91196 | Canola | nucleus | 41.46 | 10.02 |
| CDY61443 | Canola | nucleus | 43.09 | 9.81 |
| CDY41534 | Canola | nucleus | 12.2 | 8.11 |
| CDX99146 | Canola | nucleus | 25.2 | 6.95 |
| CDY10159 | Canola | cytosol | 28.46 | 6.63 |
| CDY47702 | Canola | cytosol | 27.64 | 6.53 |
| CDY40734 | Canola | nucleus | 21.14 | 5.45 |
| CDY44786 | Canola | nucleus | 20.33 | 5.19 |
| CDY41533 | Canola | nucleus | 18.7 | 4.33 |
| CDX75425 | Canola | nucleus | 20.33 | 4.23 |
| CDX69049 | Canola | nucleus | 20.33 | 4.19 |
| CDY31353 | Canola | nucleus | 14.63 | 4.04 |
| CDY39850 | Canola | nucleus | 14.63 | 4.04 |
| CDY49768 | Canola | nucleus | 15.45 | 3.96 |
| CDY03991 | Canola | nucleus | 15.45 | 3.93 |
| CDX99147 | Canola | nucleus | 10.57 | 3.67 |
| CDX79439 | Canola | nucleus | 9.76 | 3.67 |
| CDX84439 | Canola | nucleus | 19.51 | 3.66 |
| CDY21562 | Canola | nucleus | 18.7 | 3.46 |
| CDY49559 | Canola | nucleus | 16.26 | 3.44 |
| CDY20037 | Canola | nucleus | 14.63 | 3.44 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 18.7 | 3.43 |
| CDX71262 | Canola | nucleus | 15.45 | 3.27 |
| CDX84438 | Canola | cytosol | 9.76 | 3.26 |
| CDY00148 | Canola | nucleus | 12.2 | 3.1 |
Protein Annotations
| MapMan:35.1 | GO:A0A078H7H7 | UniProt:A0A078H7H7 | EnsemblPlants:CDY34490 | ProteinID:CDY34490 | ProteinID:CDY34490.1 |
| InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00056855001 |
| PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | UniPathway:UPA00143 | UniParc:UPI0004EEFB3E | SEG:seg | : |
Description
BnaC04g13090DBnaC04g13090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7H7]
Coordinates
chrLK032335:-:67451..68553
Molecular Weight (calculated)
13085.5 Da
IEP (calculated)
7.248
GRAVY (calculated)
-0.372
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRCPDPSCV AADTFLDPIL KTTESLTLLN GSGEAESGLE RLHQCVEKEL LQFLNGEGPS KDFNDFRTKL AGLTSVTKNY FENLVKALEN GLAGVDSHAA
101: CSSKSTGCSS KTRVKGKGSS RTG
101: CSSKSTGCSS KTRVKGKGSS RTG
001: MDNIERVSVV LSITEVEASI LLRHFHWSVG RVHDEWFADE ERVRKTVGIL ESHVVPPSDD SELTCGICFD SYPPEKIASV SCGHPFCTTC WTGYISTTIN
101: DGPGCLMLRC PDPSCLAAVG HDMVDKLASE DEKEKYNRYF LRSYIEDNRK MKWCPAPGCD FAIDFVAGSG NYDVSCLCSF SFCWNCTEEA HRPVDCSTVS
201: KWILKNSAES ENMNWILANS KPCPRCKRPI EKNQGCMHMT CTPPCKYEFC WLCLGAWMDH GERTGGFYAC NRYEVAKQEG QYDETERRRE MAKNSLERYT
301: HYYERWASNQ TSRQKAMADL QQAQMQNLEK LSDKQCTPES QLKFILEAWL QIIECRRVLK WTYAYGYYLP EHEHAKRQFF EYLQGEAESG LERLHQCVEK
401: DLVQFLIAEG PSKDFNDFRT KLAGLTSVTK NYFENLVKAL ENGLADVDSH AACSSKSTSS KSTGCSSKTR GKGKGSSRTG GSSRNPDDNL
101: DGPGCLMLRC PDPSCLAAVG HDMVDKLASE DEKEKYNRYF LRSYIEDNRK MKWCPAPGCD FAIDFVAGSG NYDVSCLCSF SFCWNCTEEA HRPVDCSTVS
201: KWILKNSAES ENMNWILANS KPCPRCKRPI EKNQGCMHMT CTPPCKYEFC WLCLGAWMDH GERTGGFYAC NRYEVAKQEG QYDETERRRE MAKNSLERYT
301: HYYERWASNQ TSRQKAMADL QQAQMQNLEK LSDKQCTPES QLKFILEAWL QIIECRRVLK WTYAYGYYLP EHEHAKRQFF EYLQGEAESG LERLHQCVEK
401: DLVQFLIAEG PSKDFNDFRT KLAGLTSVTK NYFENLVKAL ENGLADVDSH AACSSKSTSS KSTGCSSKTR GKGKGSSRTG GSSRNPDDNL
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.