Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G216900.1 | Wheat | nucleus | 99.66 | 99.66 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 98.3 | 98.64 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 97.28 | 97.28 |
| EES11042 | Sorghum | nucleus | 86.08 | 86.08 |
| Os04t0492100-01 | Rice | nucleus | 68.59 | 85.59 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 85.4 | 85.4 |
| Zm00001d003207_P001 | Maize | nucleus | 85.06 | 85.06 |
| Zm00001d025750_P011 | Maize | extracellular | 84.38 | 84.38 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 77.25 | 77.51 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 72.33 | 76.07 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 71.14 | 75.91 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 74.7 | 74.96 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 73.51 | 73.76 |
| Bra021726.1-P | Field mustard | nucleus | 62.82 | 73.71 |
| Solyc06g073340.2.1 | Tomato | nucleus | 66.72 | 71.45 |
| Bra022845.1-P | Field mustard | nucleus | 67.06 | 71.43 |
| CDY19083 | Canola | nucleus | 67.23 | 71.35 |
| KRH23186 | Soybean | nucleus | 71.31 | 71.31 |
| CDX84781 | Canola | nucleus | 67.06 | 71.3 |
| KRH10154 | Soybean | nucleus | 71.14 | 71.14 |
| KRH29654 | Soybean | nucleus | 70.63 | 70.99 |
| PGSC0003DMT400069483 | Potato | nucleus | 66.72 | 70.81 |
| CDY15392 | Canola | nucleus | 66.89 | 70.74 |
| KRH24651 | Soybean | nucleus | 70.12 | 70.48 |
| CDY23938 | Canola | nucleus | 66.21 | 70.02 |
| AT2G31510.1 | Thale cress | nucleus | 66.72 | 69.93 |
| Bra015463.1-P | Field mustard | nucleus | 64.86 | 68.46 |
| CDY47704 | Canola | nucleus | 64.69 | 68.28 |
| CDY10162 | Canola | nucleus | 64.18 | 68.11 |
| CDX86547 | Canola | nucleus | 63.16 | 67.15 |
| CDY63791 | Canola | nucleus | 62.82 | 66.91 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 62.31 | 61.78 |
| CDY34490 | Canola | cytosol | 12.39 | 59.35 |
| CDX79440 | Canola | cytosol | 17.15 | 59.06 |
| CDX70415 | Canola | nucleus | 52.29 | 58.67 |
| TraesCS5D01G305000.1 | Wheat | nucleus | 55.18 | 57.83 |
| Bra006112.1-P | Field mustard | nucleus | 52.29 | 57.68 |
| CDY68344 | Canola | nucleus | 48.73 | 57.63 |
| Bra021742.1-P | Field mustard | nucleus | 48.39 | 57.23 |
| CDX78438 | Canola | nucleus | 47.71 | 56.77 |
| CDY68345 | Canola | cytosol | 42.27 | 56.72 |
| TraesCS7D01G267600.2 | Wheat | nucleus | 57.73 | 56.29 |
| CDX91196 | Canola | nucleus | 48.22 | 55.8 |
| Bra023338.1-P | Field mustard | nucleus | 51.95 | 55.43 |
| AT2G31780.1 | Thale cress | nucleus | 41.6 | 55.3 |
| Zm00001d046141_P001 | Maize | cytosol | 26.49 | 54.93 |
| CDY61443 | Canola | nucleus | 50.25 | 54.81 |
| Bra005642.1-P | Field mustard | nucleus | 46.69 | 53.92 |
| Bra022865.1-P | Field mustard | nucleus | 47.54 | 53.74 |
| CDX84759 | Canola | nucleus | 47.54 | 53.74 |
| AT2G31760.1 | Thale cress | nucleus | 46.18 | 52.92 |
| CDY15373 | Canola | nucleus | 48.9 | 52.65 |
| AT2G31770.1 | Thale cress | nucleus | 47.88 | 51.93 |
| CDY42068 | Canola | nucleus | 40.24 | 51.86 |
| CDX79439 | Canola | nucleus | 28.69 | 51.68 |
| CDY15374 | Canola | nucleus | 49.07 | 50.44 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 23.94 | 47.96 |
| TraesCS7D01G073800.1 | Wheat | nucleus | 35.14 | 42.16 |
| TraesCS5D01G370300.1 | Wheat | nucleus | 38.54 | 38.15 |
| TraesCS6D01G402400.1 | Wheat | nucleus | 35.14 | 36.7 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 26.15 | 24.84 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 22.41 | 24.72 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 22.07 | 24.16 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 21.56 | 23.78 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 |
| PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00647 | SUPFAM:SSF57850 | EnsemblPlantsGene:TraesCS6D01G198600 |
| EnsemblPlants:TraesCS6D01G198600.5 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | TIGR:cd16623 | SEG:seg | : |
Description
No Description!
Coordinates
chr6D:+:276873140..276884404
Molecular Weight (calculated)
66120.6 Da
IEP (calculated)
4.999
GRAVY (calculated)
-0.687
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEDDTRDS ADEDFYSGGE AGLALSDDGE ADYDFADRDS DDSDDLISHR QQQNYSVLSE TDIKQHQADD MNRVSTVLSI SKSEACALLR SYNWSVSKVH
101: DEWFVDEARV RTAVGLPEKQ NEMPNERELT CGICFESCPR ESMGAASCGH PFCGVCWRGY ISTAINDGPG CLMLRCPDPS CSAAVGQDMV NLFASDEDKG
201: KYERYLCRSY IEDNRKTKWC PAPGCEYAVE FVVGSGSYDV SCGCSYGFCW NCTEEAHRPV DCSTVSKWIL KNSAESENMN WILANSKPCP KCKRPIEKNQ
301: GCMHITCTPP CKFEFCWLCL GPWSDHGERT GGFYACNRYE AARQEGAFDD SERRREMAKN SLERYTHYYE RWAANQSSRQ KALGDLQSLQ NDKLEKLSDI
401: QSQPESQLKF IIEAWLQIVE CRRVLKWTYA YGYYLPDHEH AKRQFFEYVQ GEAESGLERL HQCAEKELQI YLDADCPSKD FNDFRTKLAG LTSVTRNYFE
501: NLVRALESGL NDVGAHTGQG ACSKAVSSKN LGGKSKSGKN KAPVGASKSG SSTRGMDDGN IWACDQCTFA NPRSARSCQR HMAHEVTGL
101: DEWFVDEARV RTAVGLPEKQ NEMPNERELT CGICFESCPR ESMGAASCGH PFCGVCWRGY ISTAINDGPG CLMLRCPDPS CSAAVGQDMV NLFASDEDKG
201: KYERYLCRSY IEDNRKTKWC PAPGCEYAVE FVVGSGSYDV SCGCSYGFCW NCTEEAHRPV DCSTVSKWIL KNSAESENMN WILANSKPCP KCKRPIEKNQ
301: GCMHITCTPP CKFEFCWLCL GPWSDHGERT GGFYACNRYE AARQEGAFDD SERRREMAKN SLERYTHYYE RWAANQSSRQ KALGDLQSLQ NDKLEKLSDI
401: QSQPESQLKF IIEAWLQIVE CRRVLKWTYA YGYYLPDHEH AKRQFFEYVQ GEAESGLERL HQCAEKELQI YLDADCPSKD FNDFRTKLAG LTSVTRNYFE
501: NLVRALESGL NDVGAHTGQG ACSKAVSSKN LGGKSKSGKN KAPVGASKSG SSTRGMDDGN IWACDQCTFA NPRSARSCQR HMAHEVTGL
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.