Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G376800.1 | Wheat | nucleus | 97.15 | 97.15 |
| TraesCS5D01G370300.1 | Wheat | nucleus | 54.18 | 44.71 |
| TraesCS6D01G402400.1 | Wheat | nucleus | 45.01 | 39.18 |
| TraesCS5D01G305000.1 | Wheat | nucleus | 40.73 | 35.59 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 42.16 | 35.14 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 42.16 | 35.14 |
| TraesCS7D01G267600.2 | Wheat | nucleus | 43.18 | 35.1 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 26.88 | 24.72 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 26.48 | 24.34 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 25.66 | 23.42 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 26.07 | 20.65 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 |
| ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF216 | SMART:SM00184 | SMART:SM00647 |
| SUPFAM:SSF57850 | EnsemblPlantsGene:TraesCS7D01G073800 | EnsemblPlants:TraesCS7D01G073800.1 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS |
| TIGR:cd16623 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:43241678..43243153
Molecular Weight (calculated)
55527.0 Da
IEP (calculated)
4.866
GRAVY (calculated)
-0.543
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSDNDDQG YSDFDEEEDP IELESDDDMA TLLAARRQRY KVLTEGALRA LQDDCIAGVA DLIQVPPAIA AIVLRHCHWS ALVVQEKWFS DEQGLRAAVG
101: LLPPSDGDAV AEPKRKRKGK KLTCDLCFDN HPPGQMKSAG CGHLYCRVCW RGYIRAAVED GARCLSLRCP DPSCSAAVLR DLVDDVADEE DKQRYAGFAL
201: RSYVEESKTM RWCPAPGCGL AMEYLGGESL SEQLDVVCDC GHGFCIVCAE ESHRPVPCRT VREWAAKNSS ESESTNWVMA NTKLCPKCRR PIEKNTGCNH
301: MTCRDPCRHQ FCWICLADYH GGHTCNRYEV DEIDARQAYA RASLDRYMHY YERWVAHEHS RVRASEDMFE LESAREGYLE GAAADEAQRQ LGFLIDAYRQ
401: ILEGRRMLRW TYAYGYFADR DKLNLLECLQ GEAEGSLERL HKMAEAERTA SENYYAADGG VSSYFDRLAK LTKQTHDYFE SMAEAFQTDL D
101: LLPPSDGDAV AEPKRKRKGK KLTCDLCFDN HPPGQMKSAG CGHLYCRVCW RGYIRAAVED GARCLSLRCP DPSCSAAVLR DLVDDVADEE DKQRYAGFAL
201: RSYVEESKTM RWCPAPGCGL AMEYLGGESL SEQLDVVCDC GHGFCIVCAE ESHRPVPCRT VREWAAKNSS ESESTNWVMA NTKLCPKCRR PIEKNTGCNH
301: MTCRDPCRHQ FCWICLADYH GGHTCNRYEV DEIDARQAYA RASLDRYMHY YERWVAHEHS RVRASEDMFE LESAREGYLE GAAADEAQRQ LGFLIDAYRQ
401: ILEGRRMLRW TYAYGYFADR DKLNLLECLQ GEAEGSLERL HKMAEAERTA SENYYAADGG VSSYFDRLAK LTKQTHDYFE SMAEAFQTDL D
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.