Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G165100.2 | Wheat | nucleus | 98.51 | 98.51 |
| TraesCS7A01G267200.4 | Wheat | nucleus | 97.85 | 98.01 |
| HORVU7Hr1G056040.5 | Barley | nucleus, plastid | 92.88 | 84.49 |
| Os08t0540300-01 | Rice | nucleus | 81.29 | 80.89 |
| HORVU7Hr1G056020.3 | Barley | cytosol | 37.58 | 80.5 |
| EES15269 | Sorghum | nucleus | 78.48 | 79.53 |
| Zm00001d052709_P002 | Maize | plastid | 60.1 | 73.93 |
| Zm00001d031694_P003 | Maize | nucleus | 76.82 | 70.95 |
| TraesCS5D01G305000.1 | Wheat | nucleus | 61.42 | 66.01 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 58.28 | 59.76 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 56.29 | 57.73 |
| TraesCS7D01G073800.1 | Wheat | nucleus | 35.1 | 43.18 |
| TraesCS5D01G370300.1 | Wheat | nucleus | 39.07 | 39.66 |
| TraesCS6D01G402400.1 | Wheat | nucleus | 35.43 | 37.94 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 22.68 | 25.66 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 25.5 | 24.84 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 22.02 | 24.72 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 21.36 | 24.16 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:2.20.28.140 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR001876 |
| InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS01358 | PFscan:PS50089 | PFscan:PS50199 | PANTHER:PTHR11685 |
| PANTHER:PTHR11685:SF154 | SMART:SM00547 | SMART:SM00647 | SUPFAM:SSF57850 | SUPFAM:SSF90209 | EnsemblPlantsGene:TraesCS7D01G267600 |
| EnsemblPlants:TraesCS7D01G267600.2 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | SEG:seg |
Description
No Description!
Coordinates
chr7D:+:251356491..251363995
Molecular Weight (calculated)
68374.5 Da
IEP (calculated)
4.675
GRAVY (calculated)
-0.635
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDSEMPVA SDEEMVDDED YYYYSDEGEG DDGDASGGGG ASGDEDVSAG DYEGREAEGS DEAVSTREQR YIVLTEKDIS ERQEEDISEV SALLMIPREE
101: ASVLLHHYKW DISKVSDEWF SDEDKVRGIV GLLMNGTDFH NLRKLFWLQL TCGICFEGYS SDMMSSAGCA HLYCHECWEG YISAAVSQGP GCLSLRCPDP
201: SCSAIVLQGM INKLGKHEDK EKYARFALRA YVESRKKTKW CPAPDCTCAV EFVSDVNYDV SCNCTFRFCW NCTEEAHRPV NCDTVSKWIL KNSAESENMN
301: WILANSKPCP KCQRPIEKNQ GCMHMTCTPP CKFEFCWLCL GSWIEHGERT GGFYACNRYE SAKKEGVYDE AEARRERAKH SLERYMHYYE RWASNQTSRQ
401: KAIADLQKAE KEQLAKLTEI YGIPETQLKF IIEAWSQIIE CRRVLQWTYA YGYYLEDKVK SGFFEYLQGE AESGLERLHQ CAEKDLLAFL PFSKHDTTED
501: HPSPAEFGEF RVKLAGLTSI TRNYFENLVR ALEDGLEDVQ CAGEAATSSK ATNSKKAGAK GKVAKKQPSR SSSDHSDDTW PCERCTFLNP SSADACTACD
601: KQRY
101: ASVLLHHYKW DISKVSDEWF SDEDKVRGIV GLLMNGTDFH NLRKLFWLQL TCGICFEGYS SDMMSSAGCA HLYCHECWEG YISAAVSQGP GCLSLRCPDP
201: SCSAIVLQGM INKLGKHEDK EKYARFALRA YVESRKKTKW CPAPDCTCAV EFVSDVNYDV SCNCTFRFCW NCTEEAHRPV NCDTVSKWIL KNSAESENMN
301: WILANSKPCP KCQRPIEKNQ GCMHMTCTPP CKFEFCWLCL GSWIEHGERT GGFYACNRYE SAKKEGVYDE AEARRERAKH SLERYMHYYE RWASNQTSRQ
401: KAIADLQKAE KEQLAKLTEI YGIPETQLKF IIEAWSQIIE CRRVLQWTYA YGYYLEDKVK SGFFEYLQGE AESGLERLHQ CAEKDLLAFL PFSKHDTTED
501: HPSPAEFGEF RVKLAGLTSI TRNYFENLVR ALEDGLEDVQ CAGEAATSSK ATNSKKAGAK GKVAKKQPSR SSSDHSDDTW PCERCTFLNP SSADACTACD
601: KQRY
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.