Factsheet for HORVU7Hr1G056020.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052709_P002	Maize	plastid	70.57	40.53
TraesCS7A01G267200.4	Wheat	nucleus	80.85	37.81
TraesCS7B01G165100.2	Wheat	nucleus	80.85	37.75
TraesCS7D01G267600.2	Wheat	nucleus	80.5	37.58
HORVU7Hr1G056040.5	Barley	nucleus, plastid	82.98	35.24
EES15269	Sorghum	nucleus	72.69	34.4
Os08t0540300-01	Rice	nucleus	73.4	34.1
HORVU5Hr1G078470.2	Barley	nucleus	61.7	31.18
Zm00001d031694_P003	Maize	nucleus	71.28	30.73
HORVU3Hr1G049680.1	Barley	nucleus	39.01	30.3
HORVU6Hr1G055260.4	Barley	nucleus	59.57	28.52
HORVU2Hr1G085060.3	Barley	cytosol	62.77	26.46
HORVU5Hr1G089940.1	Barley	cytosol	29.43	24.92
HORVU3Hr1G019640.1	Barley	cytosol, peroxisome, plastid	18.44	24.41
HORVU5Hr1G089020.2	Barley	nucleus	42.55	19.8
HORVU4Hr1G066180.1	Barley	nucleus	29.43	13.39
HORVU4Hr1G011910.1	Barley	cytosol, plastid	28.37	13.07
HORVU4Hr1G011770.1	Barley	nucleus	24.82	13.04
HORVU1Hr1G018020.1	Barley	cytosol	2.13	3.26
HORVU7Hr1G068450.2	Barley	nucleus	2.13	2.34

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	UniProt:A0A287WL52	InterPro:E3_UB_ligase_RBR	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0046872	EnsemblPlantsGene:HORVU7Hr1G056020	EnsemblPlants:HORVU7Hr1G056020.3
InterPro:IBR_dom	PFAM:PF01485	PANTHER:PTHR11685	PANTHER:PTHR11685:SF154	SMART:SM00647	SUPFAM:SSF57850
UniParc:UPI000B46B37A	SEG:seg	:	:	:	:

Description

RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A287WL52]

Coordinates

chrchr7H:+:231068197..231070400

Molecular Weight (calculated)

29138.8 Da

IEP (calculated)

8.195

GRAVY (calculated)

-0.441

Length

282 amino acids

Sequence
(BLAST)

001: GSVLIFSKEP EGYISAAVSQ GPGCLSLRCP DPSCRAIVLE GMINKLGKHE DREKYARFAL RAYVESGKKT KWCPAPDCTC AVEFVSDVNY DVSCNCTFRF
101: CWNCTEEAHR PVNCRTVSMW ILKNSAESEN MNWILANSKP CPKCQRPIEK NQGCMHMTCT PPCKFEFCWL CLGSWVEHGE RTGGFYACNR YESAKKEGVY
201: DEAEARRERA KHSLERYMHY YERWASNQTI IHKCYLIRQY VSKYYLKFVF YXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XX

Best Arabidopsis Sequence Match ( AT1G05890.1 )
(BLAST)

001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN

Arabidopsis Description

ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.