Factsheet for HORVU7Hr1G068450.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G018020.1	Barley	cytosol	57.42	79.89
HORVU4Hr1G066180.1	Barley	nucleus	95.31	39.35
TraesCS4B01G236900.1	Wheat	nucleus	93.36	38.55
TraesCS4D01G238400.2	Wheat	nucleus	92.97	38.39
TraesCS4A01G061500.1	Wheat	nucleus	92.97	38.39
Os03t0233500-01	Rice	nucleus	83.2	34.8
EER92613	Sorghum	nucleus	79.3	33.61
Zm00001d028285_P003	Maize	nucleus	79.3	32.74
GSMUA_Achr6P23120_001	Banana	nucleus	70.7	28.15
Zm00001d048017_P003	Maize	nucleus	74.61	24.97
KRH29521	Soybean	nucleus	55.86	24.66
KRH24517	Soybean	nucleus	55.47	24.48
VIT_03s0063g02000.t01	Wine grape	nucleus	54.69	23.77
PGSC0003DMT400064832	Potato	nucleus	51.56	22.37
AT2G16090.1	Thale cress	nucleus	51.56	22.26
CDX75425	Canola	nucleus	51.17	22.17
Bra011524.1-P	Field mustard	nucleus	51.17	22.17
Solyc01g109280.2.1	Tomato	nucleus	50.78	22.03
AT4G34370.1	Thale cress	nucleus	51.17	21.94
CDX69049	Canola	nucleus	51.17	21.94
CDX71262	Canola	nucleus	49.61	21.86
CDY49559	Canola	nucleus	49.61	21.82
Bra001960.1-P	Field mustard	nucleus	49.61	21.82
AT3G27720.1	Thale cress	nucleus	41.02	21.3
AT3G27710.1	Thale cress	nucleus	40.23	19.18
VIT_18s0001g11740.t01	Wine grape	cytosol	41.41	19.1
PGSC0003DMT400043486	Potato	cytosol	36.72	18.04
Solyc04g079780.2.1	Tomato	cytosol	35.94	17.62
CDY00148	Canola	nucleus	32.03	16.94
CDY49768	Canola	nucleus	31.64	16.88
CDY03991	Canola	nucleus	31.64	16.74
PGSC0003DMT400039948	Potato	nucleus	34.77	16.39
Solyc12g089000.1.1	Tomato	nucleus	33.59	16.01
Bra039068.1-P	Field mustard	nucleus	32.03	15.65
CDY20037	Canola	nucleus	32.03	15.65
Bra033024.1-P	Field mustard	nucleus	32.03	15.59
HORVU4Hr1G011770.1	Barley	nucleus	23.83	11.36
HORVU4Hr1G011910.1	Barley	cytosol, plastid	26.17	10.95
HORVU5Hr1G089940.1	Barley	cytosol	11.72	9.01
HORVU3Hr1G049680.1	Barley	nucleus	9.77	6.89
HORVU6Hr1G055260.4	Barley	nucleus	15.23	6.62
HORVU7Hr1G056040.5	Barley	nucleus, plastid	14.45	5.57
HORVU2Hr1G085060.3	Barley	cytosol	14.45	5.53
HORVU5Hr1G089020.2	Barley	nucleus	11.72	4.95
HORVU5Hr1G078470.2	Barley	nucleus	9.38	4.3
HORVU7Hr1G056020.3	Barley	cytosol	2.34	2.13
HORVU3Hr1G019640.1	Barley	cytosol, peroxisome, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU7Hr1G068450.2	EnsemblPlantsGene:HORVU7Hr1G068450	Gene3D:1.20.120.1750	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:E3_UB_ligase_RBR	PANTHER:PTHR11685	PANTHER:PTHR11685:SF150	UniParc:UPI000B477702	UniProt:A0A287WRW6
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:362140067..362141521

Molecular Weight (calculated)

29790.0 Da

IEP (calculated)

6.315

GRAVY (calculated)

-0.857

Length

256 amino acids

Sequence
(BLAST)

001: MHYHNRYKAH TDSLKQEEKL KRDIQWKISI SENKDSKIKD YSWVINGLNR LFRSRRVLSY SYPFAFYMFG DEIFKDEMTP EERELKQNLF EDQQQQLEFN
101: VDRLSGFLEK DFQNFSDEEV MDTMKHVINL SNVVDRLCKQ MYQCIDNDLL YPLCMPHNIA PYKSKGLDRA SELHISLDSA EQSSPSMKCR QDEDKSQPGL
201: CSESGSSLTG NRPILQLHGA SSDNNGRRSH KRERRDAYGG GALFDLNVPA EVADKI

Best Arabidopsis Sequence Match ( AT2G16090.1 )
(BLAST)

001: MDDNLSGEEE DYYYSSDQES LNGIDNDESV SIPVSSRSNT VKVITKESLL AAQREDLRRV MELLSVKEHH ARTLLIHYRW DVEKLFAVLV EKGKDSLFSG
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK

Arabidopsis Description

ARI2Probable E3 ubiquitin-protein ligase ARI2 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.