Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039068.1-P | Field mustard | nucleus | 99.43 | 99.43 |
| CDY00148 | Canola | nucleus | 86.83 | 94.01 |
| CDY03991 | Canola | nucleus | 66.03 | 71.49 |
| CDY49768 | Canola | nucleus | 65.27 | 71.25 |
| AT3G27710.1 | Thale cress | nucleus | 62.98 | 61.45 |
| AT3G27720.1 | Thale cress | nucleus | 50.76 | 53.96 |
| CDX75425 | Canola | nucleus | 60.5 | 53.64 |
| CDX69049 | Canola | nucleus | 60.69 | 53.27 |
| CDY49559 | Canola | nucleus | 59.16 | 53.26 |
| CDX71262 | Canola | nucleus | 58.4 | 52.67 |
| VIT_18s0001g11740.t01 | Wine grape | cytosol | 54.39 | 51.35 |
| KRH24517 | Soybean | nucleus | 55.34 | 50.0 |
| Solyc04g079780.2.1 | Tomato | cytosol | 49.62 | 49.81 |
| KRH29521 | Soybean | nucleus | 54.96 | 49.66 |
| PGSC0003DMT400043486 | Potato | cytosol | 49.24 | 49.52 |
| PGSC0003DMT400064832 | Potato | nucleus | 54.77 | 48.64 |
| VIT_03s0063g02000.t01 | Wine grape | nucleus | 54.58 | 48.56 |
| Solyc01g109280.2.1 | Tomato | nucleus | 54.58 | 48.47 |
| Solyc12g089000.1.1 | Tomato | nucleus | 49.62 | 48.42 |
| PGSC0003DMT400039948 | Potato | nucleus | 49.81 | 48.07 |
| GSMUA_Achr5P01850_001 | Banana | nucleus | 45.99 | 44.71 |
| Os03t0233500-01 | Rice | nucleus | 51.34 | 43.95 |
| EER92613 | Sorghum | nucleus | 50.57 | 43.87 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 51.53 | 43.55 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 51.15 | 43.23 |
| TraesCS4B01G236900.1 | Wheat | nucleus | 51.15 | 43.23 |
| HORVU4Hr1G066180.1 | Barley | nucleus | 51.15 | 43.23 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 52.1 | 42.46 |
| Zm00001d028285_P003 | Maize | nucleus | 50.0 | 42.26 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 40.08 | 39.33 |
| TraesCS4B01G071700.1 | Wheat | nucleus | 40.46 | 39.19 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 39.69 | 37.96 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 38.36 | 37.36 |
| TraesCS4B01G071800.1 | Wheat | nucleus | 39.12 | 37.34 |
| Os03t0625800-01 | Rice | cytosol | 38.17 | 37.04 |
| HORVU1Hr1G018020.1 | Barley | cytosol | 12.98 | 36.96 |
| EER93787 | Sorghum | nucleus | 37.02 | 36.26 |
| EER93790 | Sorghum | nucleus | 37.4 | 36.16 |
| Zm00001d013716_P002 | Maize | nucleus | 36.83 | 36.14 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 36.07 | 35.39 |
| HORVU4Hr1G011770.1 | Barley | nucleus | 36.07 | 35.2 |
| Os03t0625933-00 | Rice | nucleus | 21.95 | 34.95 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 35.69 | 34.89 |
| Zm00001d048017_P003 | Maize | nucleus | 50.19 | 34.38 |
| TraesCS4B01G070800.1 | Wheat | nucleus | 35.11 | 34.33 |
| HORVU4Hr1G011910.1 | Barley | cytosol, plastid | 38.93 | 33.33 |
| Os03t0626100-01 | Rice | nucleus | 35.5 | 32.63 |
| HORVU7Hr1G068450.2 | Barley | nucleus | 15.65 | 32.03 |
| CDX79439 | Canola | nucleus | 17.18 | 27.52 |
| CDY68344 | Canola | nucleus | 25.38 | 26.71 |
| CDY68345 | Canola | cytosol | 22.14 | 26.42 |
| CDX84759 | Canola | nucleus | 25.38 | 25.53 |
| CDY63791 | Canola | nucleus | 26.72 | 25.32 |
| CDX86547 | Canola | nucleus | 26.72 | 25.27 |
| CDX84781 | Canola | nucleus | 26.53 | 25.09 |
| CDX78438 | Canola | nucleus | 23.66 | 25.05 |
| CDY23938 | Canola | nucleus | 26.53 | 24.96 |
| CDX70415 | Canola | nucleus | 25.0 | 24.95 |
| CDY47704 | Canola | nucleus | 26.53 | 24.91 |
| CDY10162 | Canola | nucleus | 26.34 | 24.86 |
| CDX91196 | Canola | nucleus | 24.05 | 24.75 |
| CDX99147 | Canola | nucleus | 16.6 | 24.58 |
| CDY61443 | Canola | nucleus | 25.19 | 24.44 |
| CDY19083 | Canola | nucleus | 25.57 | 24.14 |
| CDY15392 | Canola | nucleus | 25.57 | 24.06 |
| CDY15373 | Canola | nucleus | 24.62 | 23.58 |
| CDY16406 | Canola | nucleus | 24.43 | 23.4 |
| CDY57807 | Canola | nucleus | 24.43 | 22.7 |
| CDY42068 | Canola | nucleus | 19.66 | 22.54 |
| CDY15374 | Canola | nucleus | 24.24 | 22.16 |
| CDX99146 | Canola | nucleus | 18.51 | 21.75 |
| CDX84438 | Canola | cytosol | 13.93 | 19.84 |
| CDY47702 | Canola | cytosol | 18.89 | 19.0 |
| CDY10159 | Canola | cytosol | 18.51 | 18.37 |
| CDY41533 | Canola | nucleus | 18.13 | 17.89 |
| CDY40734 | Canola | nucleus | 16.03 | 17.61 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 9.73 | 17.35 |
| CDY44786 | Canola | nucleus | 15.65 | 17.01 |
| CDX79440 | Canola | cytosol | 5.34 | 16.37 |
| CDY39850 | Canola | nucleus | 13.74 | 16.14 |
| CDY31353 | Canola | nucleus | 13.36 | 15.73 |
| CDY34490 | Canola | cytosol | 3.44 | 14.63 |
| CDY21562 | Canola | nucleus | 18.51 | 14.61 |
| CDX84439 | Canola | nucleus | 17.94 | 14.33 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 17.18 | 13.41 |
| CDY41534 | Canola | nucleus | 3.63 | 10.27 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078G500 | UniProt:A0A078G500 | EnsemblPlants:CDY20037 |
| ProteinID:CDY20037 | ProteinID:CDY20037.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00009874001 | InterPro:IBR_dom | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF150 |
| SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE6CDD | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | SEG:seg | : | : | : | : |
Description
BnaA09g02140DBnaA09g02140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G500]
Coordinates
chrLK032102:-:573647..575221
Molecular Weight (calculated)
61039.1 Da
IEP (calculated)
5.271
GRAVY (calculated)
-0.653
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDYYLSCE EDEEEEEDDY DKVDYDQYEQ AQREETTKST SRIMTNESLV AAQKEVLARV MELLTLKKSQ ARTLLIHYQW NVDKLLDVYS ERGKDSLFKT
101: AGLTVFSHTS LSESRYSLRK KMTCEICMDD DLQSYTMTRM DCGHCFCNNC WKEHFTVKIN EGMSKRITCM AHKCNAICDE DVVKKLVYPE LAEKFDRFLV
201: ESYVDDNKRV KWCPSTPHCG NAIRREDDGG EVECSCGHQF CFSCLSESHS PCSCLMWKLW KKKCEDESET LNWITVHTRM CPKCSKSVQR SDGCNLMTCI
301: CGQHFCWLCG GATGLSHTGT TIDGHSCGKF KEEKVKQIEI AKRDLKRYTH YYHQYRSHTD SSKQEFKLRE SVREKVASLS EKTLKSEQKW ASNGADLLFR
401: SRKVLSYTYV FAFYMFGEEL FKDEMSDEER EMKKILFENL QQQLIGYIES LSKTLNQPFD DYSSDELEKM SDETMRFGIV VDNLCKEMYE CIENELLGPT
501: VAGHNHSIAP YRSEGIEKAI EFWC
101: AGLTVFSHTS LSESRYSLRK KMTCEICMDD DLQSYTMTRM DCGHCFCNNC WKEHFTVKIN EGMSKRITCM AHKCNAICDE DVVKKLVYPE LAEKFDRFLV
201: ESYVDDNKRV KWCPSTPHCG NAIRREDDGG EVECSCGHQF CFSCLSESHS PCSCLMWKLW KKKCEDESET LNWITVHTRM CPKCSKSVQR SDGCNLMTCI
301: CGQHFCWLCG GATGLSHTGT TIDGHSCGKF KEEKVKQIEI AKRDLKRYTH YYHQYRSHTD SSKQEFKLRE SVREKVASLS EKTLKSEQKW ASNGADLLFR
401: SRKVLSYTYV FAFYMFGEEL FKDEMSDEER EMKKILFENL QQQLIGYIES LSKTLNQPFD DYSSDELEKM SDETMRFGIV VDNLCKEMYE CIENELLGPT
501: VAGHNHSIAP YRSEGIEKAI EFWC
001: MDDDYMMLDD DYGEEEDENY SEDDNYSEAE VDLQPVTSTK STSQVIKKES LVAAQKEILV RVMELLSVKE NQARTLLIYY QWNVEKLFSV FADQGKDRMF
101: SCAGLTVFVP SLVTSKKTMK CDVCMEDDLP SNVMTRMECG HRFCNDCWIG HFTVKINEGE SKRILCMAHE CKAICDEDVV RKLVSPELAD RYDRFLIESY
201: VEDNNMVKWC PSKPHCGSAI RKIEDGHDVV EVGCSCGLQF CFSCLSESHS PCSCLMWKLW KKKCEDESET VNWITVNTKL CPKCSKPIQK RDGCNLMTCK
301: CGQHFCWLCG QATGRDHTYT SIAGHSCGRY KDEKVRQLER AQRDLDRYTH YHYRYKAHID SLKLEDKLRK SILEKAVSNS ETKDQKVFKE YSWVTDAVNR
401: LFISRRILSQ SYPFAFYMFG EELFKDEMSE KEREIKKNLF EDQQQQLEGN VEKLSKILEE PFDEYDHEKV VEMMRHLTNL TAVVDNLCKE MYECIENELL
501: GPIQFGNHNI APYRSKGIEQ ATEFCAESSD CGSSGSS
101: SCAGLTVFVP SLVTSKKTMK CDVCMEDDLP SNVMTRMECG HRFCNDCWIG HFTVKINEGE SKRILCMAHE CKAICDEDVV RKLVSPELAD RYDRFLIESY
201: VEDNNMVKWC PSKPHCGSAI RKIEDGHDVV EVGCSCGLQF CFSCLSESHS PCSCLMWKLW KKKCEDESET VNWITVNTKL CPKCSKPIQK RDGCNLMTCK
301: CGQHFCWLCG QATGRDHTYT SIAGHSCGRY KDEKVRQLER AQRDLDRYTH YHYRYKAHID SLKLEDKLRK SILEKAVSNS ETKDQKVFKE YSWVTDAVNR
401: LFISRRILSQ SYPFAFYMFG EELFKDEMSE KEREIKKNLF EDQQQQLEGN VEKLSKILEE PFDEYDHEKV VEMMRHLTNL TAVVDNLCKE MYECIENELL
501: GPIQFGNHNI APYRSKGIEQ ATEFCAESSD CGSSGSS
Arabidopsis Description
ARI3Probable E3 ubiquitin-protein ligase ARI3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVX0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.