Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47704 | Canola | nucleus | 96.4 | 95.88 |
| CDX86547 | Canola | nucleus | 88.29 | 88.45 |
| CDY63791 | Canola | nucleus | 87.21 | 87.52 |
| CDY19083 | Canola | nucleus | 78.02 | 78.02 |
| CDY15392 | Canola | nucleus | 78.2 | 77.92 |
| CDX84781 | Canola | nucleus | 77.48 | 77.62 |
| CDY23938 | Canola | nucleus | 76.76 | 76.48 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 80.54 | 75.25 |
| Solyc06g073340.2.1 | Tomato | nucleus | 68.11 | 68.73 |
| PGSC0003DMT400069483 | Potato | nucleus | 67.93 | 67.93 |
| CDX79440 | Canola | cytosol | 20.72 | 67.25 |
| CDX70415 | Canola | nucleus | 63.6 | 67.24 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 70.99 | 67.12 |
| KRH23186 | Soybean | nucleus | 70.99 | 66.89 |
| KRH10154 | Soybean | nucleus | 70.81 | 66.72 |
| KRH24651 | Soybean | nucleus | 69.55 | 65.87 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 66.31 | 65.71 |
| CDY16406 | Canola | nucleus | 64.68 | 65.63 |
| Os04t0492100-01 | Rice | nucleus | 55.68 | 65.47 |
| KRH29654 | Soybean | nucleus | 69.01 | 65.36 |
| CDX78438 | Canola | nucleus | 58.2 | 65.25 |
| CDY57807 | Canola | nucleus | 65.95 | 64.89 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 64.5 | 64.86 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 68.47 | 64.74 |
| EES11042 | Sorghum | nucleus | 68.65 | 64.69 |
| Zm00001d003207_P001 | Maize | nucleus | 68.47 | 64.52 |
| CDX91196 | Canola | nucleus | 59.1 | 64.44 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 67.93 | 64.22 |
| Zm00001d025750_P011 | Maize | extracellular | 68.11 | 64.18 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 68.11 | 64.18 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 68.11 | 64.18 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 67.93 | 64.01 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 67.75 | 63.84 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 67.57 | 63.67 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 67.57 | 63.67 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 67.03 | 63.37 |
| CDY68344 | Canola | nucleus | 56.58 | 63.05 |
| CDY61443 | Canola | nucleus | 61.08 | 62.78 |
| CDY34490 | Canola | cytosol | 13.87 | 62.6 |
| CDY68345 | Canola | cytosol | 47.57 | 60.14 |
| CDX84759 | Canola | nucleus | 55.5 | 59.12 |
| CDY42068 | Canola | nucleus | 46.67 | 56.67 |
| CDY15373 | Canola | nucleus | 55.86 | 56.67 |
| CDX79439 | Canola | nucleus | 33.15 | 56.27 |
| CDY15374 | Canola | nucleus | 55.14 | 53.4 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 28.29 | 53.4 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 63.06 | 52.32 |
| Zm00001d046141_P001 | Maize | cytosol | 24.14 | 47.18 |
| CDY47702 | Canola | cytosol | 36.04 | 38.39 |
| CDY10159 | Canola | cytosol | 36.4 | 38.26 |
| CDX99146 | Canola | nucleus | 24.5 | 30.49 |
| CDX99147 | Canola | nucleus | 18.02 | 28.25 |
| CDX84438 | Canola | cytosol | 18.56 | 27.99 |
| CDY00148 | Canola | nucleus | 23.96 | 27.48 |
| CDY44786 | Canola | nucleus | 23.06 | 26.56 |
| CDY20037 | Canola | nucleus | 24.86 | 26.34 |
| CDY49559 | Canola | nucleus | 27.21 | 25.95 |
| CDX75425 | Canola | nucleus | 27.57 | 25.89 |
| CDY40734 | Canola | nucleus | 22.16 | 25.79 |
| CDY49768 | Canola | nucleus | 22.16 | 25.62 |
| CDX69049 | Canola | nucleus | 27.39 | 25.46 |
| CDX71262 | Canola | nucleus | 26.49 | 25.3 |
| CDY03991 | Canola | nucleus | 21.8 | 25.0 |
| CDY41533 | Canola | nucleus | 23.06 | 24.11 |
| CDY39850 | Canola | nucleus | 18.38 | 22.87 |
| CDY31353 | Canola | nucleus | 18.2 | 22.7 |
| CDY41534 | Canola | nucleus | 7.03 | 21.08 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 24.32 | 20.12 |
| CDX84439 | Canola | nucleus | 23.6 | 19.97 |
| CDY21562 | Canola | nucleus | 23.6 | 19.73 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078FAU8 | UniProt:A0A078FAU8 | EnsemblPlants:CDY10162 |
| ProteinID:CDY10162 | ProteinID:CDY10162.1 | ncoils:Coil | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00031976001 | InterPro:IBR_dom |
| InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 |
| SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EEE8D7 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g04050DBnaC05g04050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAU8]
Coordinates
chrLK032001:+:328790..333942
Molecular Weight (calculated)
63113.5 Da
IEP (calculated)
4.883
GRAVY (calculated)
-0.684
Length
555 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEDDLLGA HDMESGEDDF YSGGGSDDDY NETDGDEPDY GFVEEDVDDS VMIASHRSQI NYVVLKEEDI RRLQMDDIGR VSMVLSISEA EASVLLLHYH
101: WSVSKVHDEW FADEERVRKA VGILERPVVS TLDGGELTCG ICFEPFQREE VVSLACGHPF CSTCWTGYIS TTINDGPGCL MLKCPEPSCP AAVGQDMFEK
201: FASKEDKEKY YKYFLRSYIE DNRKMKWCPA PGCENAIEFT AGTSNYDVSC SCSRSFCWNC TEEAHRPVDC HTVAQWIRKN SAESENMNWI LANSKPCPKC
301: KRPIEKNHGC MHMTCTPPCK YEFCWLCLNA WTAHGERTGG FYACNRYESA KQEGLYDEAE KRREMAKNSL ERYTHYYERW ASNQTSRQKA VEDLQKAQLE
401: KLEKLSDIQC TPESQLKFIT EAWLQIIECR RVLKWTYAYG YYLPDHDKKQ FFEYLQGEAE SGLERLHKCV EKELEVFLNA EGSSDNFNHF RTKLTGLTSI
501: TKTYFENLVK ALENGLADVD ATQGASSKST SSKSSKTKGG GKGKGSYKSK NSDGN
101: WSVSKVHDEW FADEERVRKA VGILERPVVS TLDGGELTCG ICFEPFQREE VVSLACGHPF CSTCWTGYIS TTINDGPGCL MLKCPEPSCP AAVGQDMFEK
201: FASKEDKEKY YKYFLRSYIE DNRKMKWCPA PGCENAIEFT AGTSNYDVSC SCSRSFCWNC TEEAHRPVDC HTVAQWIRKN SAESENMNWI LANSKPCPKC
301: KRPIEKNHGC MHMTCTPPCK YEFCWLCLNA WTAHGERTGG FYACNRYESA KQEGLYDEAE KRREMAKNSL ERYTHYYERW ASNQTSRQKA VEDLQKAQLE
401: KLEKLSDIQC TPESQLKFIT EAWLQIIECR RVLKWTYAYG YYLPDHDKKQ FFEYLQGEAE SGLERLHKCV EKELEVFLNA EGSSDNFNHF RTKLTGLTSI
501: TKTYFENLVK ALENGLADVD ATQGASSKST SSKSSKTKGG GKGKGSYKSK NSDGN
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.