Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29654 | Soybean | nucleus | 96.76 | 96.76 |
| KRH23186 | Soybean | nucleus | 87.71 | 87.27 |
| KRH10154 | Soybean | nucleus | 87.54 | 87.1 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 77.65 | 77.51 |
| Bra021726.1-P | Field mustard | nucleus | 64.68 | 75.5 |
| Os04t0492100-01 | Rice | nucleus | 60.75 | 75.42 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 69.11 | 73.37 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 73.04 | 72.91 |
| Solyc06g073340.2.1 | Tomato | nucleus | 68.09 | 72.55 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 69.28 | 72.5 |
| PGSC0003DMT400069483 | Potato | nucleus | 68.26 | 72.07 |
| EES11042 | Sorghum | nucleus | 72.35 | 71.99 |
| CDY19083 | Canola | nucleus | 68.09 | 71.89 |
| AT2G31510.1 | Thale cress | nucleus | 68.77 | 71.71 |
| CDY15392 | Canola | nucleus | 68.09 | 71.63 |
| CDX84781 | Canola | nucleus | 67.58 | 71.48 |
| Zm00001d025750_P011 | Maize | extracellular | 71.84 | 71.48 |
| Zm00001d003207_P001 | Maize | nucleus | 71.84 | 71.48 |
| Bra022845.1-P | Field mustard | nucleus | 67.41 | 71.43 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 71.67 | 71.31 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 71.67 | 71.31 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 71.67 | 71.31 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 71.16 | 71.04 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 70.99 | 70.87 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 70.82 | 70.46 |
| CDY23938 | Canola | nucleus | 66.72 | 70.2 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 70.48 | 70.12 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 70.48 | 70.12 |
| CDY10162 | Canola | nucleus | 65.87 | 69.55 |
| CDY47704 | Canola | nucleus | 66.04 | 69.35 |
| Bra015463.1-P | Field mustard | nucleus | 65.87 | 69.18 |
| CDX86547 | Canola | nucleus | 64.16 | 67.87 |
| CDY63791 | Canola | nucleus | 63.99 | 67.81 |
| CDX79440 | Canola | cytosol | 19.11 | 65.5 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 64.68 | 63.8 |
| CDY34490 | Canola | cytosol | 12.97 | 61.79 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 67.75 | 59.34 |
| Bra023338.1-P | Field mustard | nucleus | 55.63 | 59.06 |
| CDX91196 | Canola | nucleus | 51.19 | 58.94 |
| CDY61443 | Canola | nucleus | 54.1 | 58.7 |
| CDX70415 | Canola | nucleus | 52.39 | 58.48 |
| CDY68345 | Canola | cytosol | 43.69 | 58.31 |
| CDY68344 | Canola | nucleus | 49.49 | 58.23 |
| Bra021742.1-P | Field mustard | nucleus | 49.15 | 57.83 |
| CDX78438 | Canola | nucleus | 48.46 | 57.37 |
| Bra006112.1-P | Field mustard | nucleus | 52.22 | 57.3 |
| AT2G31760.1 | Thale cress | nucleus | 48.29 | 55.06 |
| AT2G31780.1 | Thale cress | nucleus | 41.47 | 54.85 |
| Bra005642.1-P | Field mustard | nucleus | 47.1 | 54.12 |
| CDX84759 | Canola | nucleus | 47.78 | 53.74 |
| Bra022865.1-P | Field mustard | nucleus | 47.78 | 53.74 |
| CDY15373 | Canola | nucleus | 49.49 | 53.02 |
| CDY42068 | Canola | nucleus | 41.3 | 52.95 |
| AT2G31770.1 | Thale cress | nucleus | 48.98 | 52.85 |
| CDY15374 | Canola | nucleus | 50.34 | 51.48 |
| Zm00001d046141_P001 | Maize | cytosol | 24.06 | 49.65 |
| CDX79439 | Canola | nucleus | 27.13 | 48.62 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 23.55 | 46.94 |
| KRH24184 | Soybean | nucleus | 40.61 | 45.59 |
| KRH29521 | Soybean | nucleus | 26.11 | 26.38 |
| KRH24517 | Soybean | nucleus | 26.11 | 26.38 |
Protein Annotations
| Gene3D:1.20.120.1750 | EntrezGene:100795162 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | EMBL:ACUP02007179 | InterPro:E3_UB_ligase_RBR |
| EnsemblPlantsGene:GLYMA_12G053500 | GO:GO:0000151 | GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031624 | GO:GO:0032436 | GO:GO:0042787 | GO:GO:0046872 |
| GO:GO:0061630 | UniProt:I1LQF4 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR001876 | InterPro:IPR013083 |
| EMBL:JX392391 | EnsemblPlants:KRH24651 | ProteinID:KRH24651 | ProteinID:KRH24651.1 | PFAM:PF01485 | ScanProsite:PS01358 |
| PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00647 | SUPFAM:SSF57850 | UniParc:UPI000233C18E |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RanBP2 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr12:-:3838105..3845992
Molecular Weight (calculated)
67073.0 Da
IEP (calculated)
5.261
GRAVY (calculated)
-0.697
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: MESEDDMPDA NDIESLDDDF YSGETEDAPL DYYSDYDADD YFDDAERIES RRPEQNFTIL KESDIRLRQE DDVTRVATVL SISRVFASIL LRHHNWSVSR
101: VHDAWFADEE RVRKAVGLLE KPIVQHPNTR ELTCGICFEN YPRARIEMAS CGHPYCISCW EGYISTSIND GPGCLMLRCP DPTCDAAIGQ DMINLLVSDE
201: DKQKYARYLL RSYIEDNKKS KWCPAPGCEY AVTFDAGSTG NYDVSCLCSY GFCWNCTEEA HRPVDCGTVA KWILKNSAES ENMNWILANS KPCPKCKRPI
301: EKNHGCMHMT CTPPCKFEFC WLCVGAWSDH GERTGGFYAC NRYEAAKQEG VYDDTERRRE MAKNSLERYT HYYERWASNQ SSRQKALADL QQMQTVHIEK
401: LSDIQCQPES QLKFITEAWL QIIECRRVLK WTYAYGFYLP EHEHAKKQFF EYLQGEAESG LERLHQCAEK ELQPFLSADD SSREFNDFRT KLAGLTSVTR
501: NYFENLVRAL ENGLSDVGSN GAAFSKATSS KNAAGSSKGR SGRGKGTFRS STPSKMNDDS HWCCEHCTYA NAKSASTCQM CYQQRR
101: VHDAWFADEE RVRKAVGLLE KPIVQHPNTR ELTCGICFEN YPRARIEMAS CGHPYCISCW EGYISTSIND GPGCLMLRCP DPTCDAAIGQ DMINLLVSDE
201: DKQKYARYLL RSYIEDNKKS KWCPAPGCEY AVTFDAGSTG NYDVSCLCSY GFCWNCTEEA HRPVDCGTVA KWILKNSAES ENMNWILANS KPCPKCKRPI
301: EKNHGCMHMT CTPPCKFEFC WLCVGAWSDH GERTGGFYAC NRYEAAKQEG VYDDTERRRE MAKNSLERYT HYYERWASNQ SSRQKALADL QQMQTVHIEK
401: LSDIQCQPES QLKFITEAWL QIIECRRVLK WTYAYGFYLP EHEHAKKQFF EYLQGEAESG LERLHQCAEK ELQPFLSADD SSREFNDFRT KLAGLTSVTR
501: NYFENLVRAL ENGLSDVGSN GAAFSKATSS KNAAGSSKGR SGRGKGTFRS STPSKMNDDS HWCCEHCTYA NAKSASTCQM CYQQRR
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.