Factsheet for AT2G31770.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	endoplasmic reticulum, nucleus
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G31760.1	Thale cress	nucleus	77.72	82.1
AT2G31780.1	Thale cress	nucleus	59.3	72.69
CDX79440	Canola	cytosol	21.36	67.84
Bra021742.1-P	Field mustard	nucleus	61.51	67.07
CDY68344	Canola	nucleus	61.33	66.87
CDY68345	Canola	cytosol	53.96	66.74
CDX84759	Canola	nucleus	60.41	62.96
Bra022865.1-P	Field mustard	nucleus	60.41	62.96
CDX79439	Canola	nucleus	37.2	61.77
CDY15373	Canola	nucleus	61.88	61.43
Bra005642.1-P	Field mustard	nucleus	57.64	61.37
CDY42068	Canola	nucleus	50.46	59.96
CDY15374	Canola	nucleus	61.14	57.94
AT2G31510.1	Thale cress	nucleus	55.06	53.2
CDY34512	Canola	cytosol, nucleus, plastid	28.73	53.06
AT1G05890.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	55.99	51.18
GSMUA_Achr9P07970_001	Banana	nucleus	51.57	50.72
Os04t0492100-01	Rice	nucleus	44.01	50.64
VIT_05s0102g00160.t01	Wine grape	nucleus	54.51	50.43
GSMUA_Achr6P28580_001	Banana	nucleus	51.57	50.0
AT1G65430.1	Thale cress	nucleus	51.93	49.74
Solyc06g073340.2.1	Tomato	nucleus	50.09	49.45
PGSC0003DMT400069483	Potato	nucleus	50.46	49.37
KRH23186	Soybean	nucleus	53.22	49.07
Zm00001d003207_P001	Maize	nucleus	53.22	49.07
KRH29654	Soybean	nucleus	52.85	48.98
KRH24651	Soybean	nucleus	52.85	48.98
EES11042	Sorghum	nucleus	53.04	48.9
KRH10154	Soybean	nucleus	53.04	48.9
Zm00001d025750_P011	Maize	extracellular	52.67	48.56
TraesCS2D01G348000.2	Wheat	nucleus	52.3	48.22
TraesCS2A01G349600.1	Wheat	nucleus	52.3	48.22
TraesCS2B01G368000.2	Wheat	nucleus	52.3	48.22
GSMUA_Achr8P28870_001	Banana	nucleus	51.93	48.04
TraesCS6B01G245900.2	Wheat	nucleus	51.93	48.04
HORVU6Hr1G055260.4	Barley	nucleus	51.93	47.88
TraesCS6D01G198600.5	Wheat	nucleus	51.93	47.88
TraesCS6A01G216900.1	Wheat	nucleus	51.93	47.88
GSMUA_Achr3P16920_001	Banana	nucleus	51.2	47.36
Zm00001d046141_P001	Maize	cytosol	22.47	42.96
HORVU2Hr1G085060.3	Barley	cytosol	50.64	41.11
AT1G05880.2	Thale cress	cytosol	32.97	36.09
AT3G27710.1	Thale cress	nucleus	25.41	25.7
AT5G63750.1	Thale cress	nucleus	25.05	25.37
AT5G08730.1	Thale cress	cytosol	22.65	24.6
AT5G63760.2	Thale cress	nucleus	20.26	24.34
AT3G27720.1	Thale cress	nucleus	21.92	24.14
AT2G16090.1	Thale cress	nucleus	25.78	23.61
AT5G63730.1	Thale cress	cytosol	21.92	23.52
AT4G34370.1	Thale cress	nucleus	25.05	22.78

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	EntrezGene:817734	ProteinID:AAD32295.1	ProteinID:AEC08582.1
Symbol:ARI9	ArrayExpress:AT2G31770	EnsemblPlantsGene:AT2G31770	RefSeq:AT2G31770	TAIR:AT2G31770	RefSeq:AT2G31770-TAIR-G
EnsemblPlants:AT2G31770.1	TAIR:AT2G31770.1	Unigene:At.52999	ProteinID:CAD52891.1	EMBL:DQ446586	EMBL:DQ653034
InterPro:E3_UB_ligase_RBR	GO:GO:0000151	GO:GO:0000209	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0016758	GO:GO:0019538	GO:GO:0031624	GO:GO:0032436	GO:GO:0042787
GO:GO:0046872	GO:GO:0061630	InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR013083	RefSeq:NP_180736.1
PFAM:PF01485	PO:PO:0007611	PO:PO:0009005	PO:PO:0009031	PO:PO:0009046	ScanProsite:PS00518
PFscan:PS50089	PANTHER:PTHR11685	PANTHER:PTHR11685:SF177	UniProt:Q9SKC3	SMART:SM00647	SUPFAM:SSF57850
UniParc:UPI000005E82F	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg	:

Description

ARI9Probable E3 ubiquitin-protein ligase ARI9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC3]

Coordinates

chr2:+:13511579..13513550

Molecular Weight (calculated)

62918.6 Da

IEP (calculated)

4.684

GRAVY (calculated)

-0.658

Length

543 amino acids

Sequence
(BLAST)

001: MDFSDDDMID NKSGEENYSY GGGNESDDYN DVVDTIIPSE KSYVILKEED ILKLQRDDIE RVSSILSLSQ VEVIVLLLHY NWCVSKVEDE WFTDEERIRK
101: AVGLLKEPVV DFNGGEKDKK CRKVNIQCGI CFESYTREEI ARVSCGHPYC KTCWAGYITT KIEDGPGCLR VKCPEPSCSA AVGKDMIEDV TETKVNEKYS
201: RYILRSYVED GKKIKWCPSP GCGYAVEFGG SESSSYDVSC LCSYRFCWNC SEDAHSPVDC DTVSKWIFKN QDESENKNWM LANSKPCPEC KRPIEKNDGC
301: NHMTCSAPCG HEFCWICLKA YRRHSGACNR FVVEQAESKR ALLQSEIKRY THYYVRWAEN QSSRLKAMRD LEKLQSVQLK ELSDNQCTSE TQLQFTVDAW
401: LQIIECRRVL KWTYAYGYYL QDLPKRKFFE YLQGEAESGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTTVTK TYFENLVKAL ENGLVDVTHN
501: EFPPDNETKS TQEKYEEYQD YEDDFLETQR LYDEALLSGC YYD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.