Factsheet for AT5G63750.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G63760.2	Thale cress	nucleus	48.88	57.96
Bra038658.1-P	Field mustard	nucleus	46.08	57.18
CDX84438	Canola	cytosol	38.43	55.98
AT5G63730.1	Thale cress	cytosol	52.61	55.73
Bra038659.1-P	Field mustard	nucleus	50.37	53.89
CDY39850	Canola	nucleus	44.4	53.36
CDY41533	Canola	nucleus	52.61	53.11
CDY31353	Canola	nucleus	44.03	53.03
Bra029204.1-P	Field mustard	nucleus	43.84	52.81
CDY41534	Canola	nucleus	17.91	51.89
Bra038660.1-P	Field mustard	cytosol	17.72	51.35
CDX84439	Canola	nucleus	50.56	41.31
AT5G08730.1	Thale cress	cytosol	37.87	40.6
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	25.0	26.17
AT1G65430.1	Thale cress	nucleus	27.43	25.93
AT2G31760.1	Thale cress	nucleus	24.44	25.49
AT2G31780.1	Thale cress	nucleus	20.71	25.06
AT2G31770.1	Thale cress	nucleus	25.37	25.05
AT2G31510.1	Thale cress	nucleus	25.75	24.56
KRH24184	Soybean	nucleus	22.57	23.18
AT1G05890.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	25.37	22.9
AT1G05880.2	Thale cress	cytosol	20.34	21.98
AT2G16090.1	Thale cress	nucleus	19.59	17.71
AT3G27710.1	Thale cress	nucleus	17.16	17.13
AT4G34370.1	Thale cress	nucleus	17.91	16.08
AT3G27720.1	Thale cress	nucleus	14.55	15.82

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	EntrezGene:836495	ProteinID:AED97792.1	ArrayExpress:AT5G63750
EnsemblPlantsGene:AT5G63750	RefSeq:AT5G63750	TAIR:AT5G63750	RefSeq:AT5G63750-TAIR-G	EnsemblPlants:AT5G63750.1	TAIR:AT5G63750.1
Symbol:ATARI13	Unigene:At.50552	ProteinID:BAB10468.1	EMBL:BX833901	ProteinID:CAD52895.1	InterPro:E3_UB_ligase_RBR
GO:GO:0000151	GO:GO:0000209	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0031624	GO:GO:0032436	GO:GO:0042787	GO:GO:0046872	GO:GO:0061630
InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR001876	InterPro:IPR013083	RefSeq:NP_201180.1	PFAM:PF01485
PO:PO:0000084	PO:PO:0007611	PO:PO:0007616	PO:PO:0009031	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0025022	ScanProsite:PS01358	PFscan:PS50089	PANTHER:PTHR11685	PANTHER:PTHR11685:SF213
UniProt:Q9FFN9	SMART:SM00647	SUPFAM:SSF57850	UniParc:UPI000005E833	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
InterPro:Znf_RanBP2	:	:	:	:	:

Description

ARI13Probable E3 ubiquitin-protein ligase ARI13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN9]

Coordinates

chr5:-:25512994..25514941

Molecular Weight (calculated)

61607.3 Da

IEP (calculated)

6.073

GRAVY (calculated)

-0.399

Length

536 amino acids

Sequence
(BLAST)

001: MENNREGPYS VLTRDQLKGN MKKQIAEISE IFSLSKPDAT VLLMFLRWDS HEVSEFLVEN NEKVLSESGL KPVVVDPNQD LYKISSCGIC FKTCDDGDYL
101: ISTPFCSHMF CKSCWRKYLE KNFYLVEKTQ TRISCPHGAC QAAVGPDTIQ KLTVCDQEMY VEYILRSYIE GNKVLEIKYC PAQDCNYVIE FHQKNHDGAD
201: QEDYGFNVVC LCGHIFCWRC MLESHKPVTC NNASDWLFRD LNSLSKESGE KPLSLSSFET REKTYPLSSI KATKKVCPHC LRPADLGTKQ YLRFLTCACN
301: GRFCWKCMQP EEAHKTESGF YKFCNVSMTF EGRAPKTLEG RAEPENSCVG LWKASEVSLK QAKSDLQAFE ESNIKNPSDL TEKDFTIIRK GLMLIVQCRQ
401: VLKWSCVYDY LHAEYEMSKR EYLRFLQADA TSLVESFSKT LNEEIGRASS ATYENFCCVK HKVTIETSNI GNYFYHFIKT LQEGLDDVKV KSYDDYGGLF
501: WLCDRCTYGN TWFHKECLMC SDDIAARVDL SDMSLN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.