Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029204.1-P | Field mustard | nucleus | 98.65 | 98.65 |
| CDY39850 | Canola | nucleus | 92.81 | 92.6 |
| CDY41534 | Canola | nucleus | 22.02 | 52.97 |
| CDY41533 | Canola | nucleus | 58.65 | 49.15 |
| CDX84438 | Canola | cytosol | 36.85 | 44.57 |
| AT5G63750.1 | Thale cress | nucleus | 53.03 | 44.03 |
| AT5G63760.2 | Thale cress | nucleus | 43.15 | 42.48 |
| AT5G63730.1 | Thale cress | cytosol | 48.09 | 42.29 |
| CDX84439 | Canola | nucleus | 58.2 | 39.48 |
| CDX99146 | Canola | nucleus | 31.46 | 31.39 |
| CDX99147 | Canola | nucleus | 24.94 | 31.36 |
| CDY40734 | Canola | nucleus | 33.48 | 31.24 |
| CDY44786 | Canola | nucleus | 33.26 | 30.71 |
| CDY21562 | Canola | nucleus | 36.85 | 24.7 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 35.51 | 23.55 |
| CDX78438 | Canola | nucleus | 23.37 | 21.01 |
| CDY68345 | Canola | cytosol | 20.0 | 20.27 |
| CDX70415 | Canola | nucleus | 23.82 | 20.19 |
| CDY16406 | Canola | nucleus | 24.04 | 19.56 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 22.47 | 19.53 |
| CDY57807 | Canola | nucleus | 24.49 | 19.33 |
| CDX79440 | Canola | cytosol | 7.42 | 19.3 |
| CDY68344 | Canola | nucleus | 21.57 | 19.28 |
| CDY15392 | Canola | nucleus | 24.04 | 19.21 |
| CDY19083 | Canola | nucleus | 23.82 | 19.1 |
| CDX84759 | Canola | nucleus | 22.02 | 18.81 |
| CDY63791 | Canola | nucleus | 23.37 | 18.81 |
| KRH24184 | Soybean | nucleus | 22.02 | 18.77 |
| CDX79439 | Canola | nucleus | 13.71 | 18.65 |
| CDX84781 | Canola | nucleus | 23.15 | 18.59 |
| CDX86547 | Canola | nucleus | 23.15 | 18.59 |
| CDY23938 | Canola | nucleus | 22.92 | 18.31 |
| CDX91196 | Canola | nucleus | 20.9 | 18.27 |
| CDY10162 | Canola | nucleus | 22.7 | 18.2 |
| CDY47704 | Canola | nucleus | 22.7 | 18.1 |
| CDY15374 | Canola | nucleus | 22.92 | 17.8 |
| CDY61443 | Canola | nucleus | 21.57 | 17.78 |
| CDY15373 | Canola | nucleus | 20.9 | 17.0 |
| CDY42068 | Canola | nucleus | 17.3 | 16.85 |
| CDY10159 | Canola | cytosol | 19.33 | 16.29 |
| CDY47702 | Canola | cytosol | 18.88 | 16.12 |
| CDY34490 | Canola | cytosol | 4.04 | 14.63 |
| CDY00148 | Canola | nucleus | 15.51 | 14.26 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 9.21 | 13.95 |
| CDX71262 | Canola | nucleus | 18.2 | 13.94 |
| CDY49559 | Canola | nucleus | 17.75 | 13.57 |
| CDY20037 | Canola | nucleus | 15.73 | 13.36 |
| CDY49768 | Canola | nucleus | 13.93 | 12.92 |
| CDY03991 | Canola | nucleus | 13.93 | 12.81 |
| CDX69049 | Canola | nucleus | 16.4 | 12.23 |
| CDX75425 | Canola | nucleus | 16.18 | 12.18 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:35.1 | GO:A0A078H3E3 | UniProt:A0A078H3E3 | EnsemblPlants:CDY31353 | ProteinID:CDY31353 |
| ProteinID:CDY31353.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00047544001 | InterPro:IBR_dom | InterPro:IPR001876 | PFAM:PF01485 |
| ScanProsite:PS01358 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF213 | SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 |
| UniParc:UPI0004EE2825 | InterPro:Znf_RanBP2 | : | : | : | : |
Description
BnaA02g33880DBnaA02g33880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3E3]
Coordinates
chrLK032270:+:400175..402169
Molecular Weight (calculated)
51083.5 Da
IEP (calculated)
4.936
GRAVY (calculated)
-0.375
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHDPEREYS FLTRDDLKEK MNKQIDDLSE IFLLSKPAAT VLLMNFHWDS QRVSERLSED KEKLLMRSGL MSSNYGDSFF SVEKNLAMLT LEAKDMHSEY
101: VLRSFLEENK GLTIEQCPAP GCGYFIEFQR DIGFEEYGLN VVCLCGHTFC GRCRLETHGP VTCNNASDWL RDLGKLSESL SVSWIESNTK PCPHCQFPLE
201: VGSRSRLFRF VECLYCSGRF CSECMQTVES HNTADGYYGA CVAPLPPQLM NGPEAVVVTC VDRWEASDVA MVEAKSELES FDESHFTSQE YIRNMREGLM
301: LIVQCRQFLK WSCVYDHVHT EYQASKREYL RFLQDFASTL VQSYSETLKE ETVKDFSATT HEETICPKWK LANATSSIGN FFFHFSKTLQ DGIDDVKVKS
401: YDNFAGPYWL CDRCTSGNTW LDMRCKMCCA SATPVEKKLR DLSLN
101: VLRSFLEENK GLTIEQCPAP GCGYFIEFQR DIGFEEYGLN VVCLCGHTFC GRCRLETHGP VTCNNASDWL RDLGKLSESL SVSWIESNTK PCPHCQFPLE
201: VGSRSRLFRF VECLYCSGRF CSECMQTVES HNTADGYYGA CVAPLPPQLM NGPEAVVVTC VDRWEASDVA MVEAKSELES FDESHFTSQE YIRNMREGLM
301: LIVQCRQFLK WSCVYDHVHT EYQASKREYL RFLQDFASTL VQSYSETLKE ETVKDFSATT HEETICPKWK LANATSSIGN FFFHFSKTLQ DGIDDVKVKS
401: YDNFAGPYWL CDRCTSGNTW LDMRCKMCCA SATPVEKKLR DLSLN
001: MENNREGPYS VLTRDQLKGN MKKQIAEISE IFSLSKPDAT VLLMFLRWDS HEVSEFLVEN NEKVLSESGL KPVVVDPNQD LYKISSCGIC FKTCDDGDYL
101: ISTPFCSHMF CKSCWRKYLE KNFYLVEKTQ TRISCPHGAC QAAVGPDTIQ KLTVCDQEMY VEYILRSYIE GNKVLEIKYC PAQDCNYVIE FHQKNHDGAD
201: QEDYGFNVVC LCGHIFCWRC MLESHKPVTC NNASDWLFRD LNSLSKESGE KPLSLSSFET REKTYPLSSI KATKKVCPHC LRPADLGTKQ YLRFLTCACN
301: GRFCWKCMQP EEAHKTESGF YKFCNVSMTF EGRAPKTLEG RAEPENSCVG LWKASEVSLK QAKSDLQAFE ESNIKNPSDL TEKDFTIIRK GLMLIVQCRQ
401: VLKWSCVYDY LHAEYEMSKR EYLRFLQADA TSLVESFSKT LNEEIGRASS ATYENFCCVK HKVTIETSNI GNYFYHFIKT LQEGLDDVKV KSYDDYGGLF
501: WLCDRCTYGN TWFHKECLMC SDDIAARVDL SDMSLN
101: ISTPFCSHMF CKSCWRKYLE KNFYLVEKTQ TRISCPHGAC QAAVGPDTIQ KLTVCDQEMY VEYILRSYIE GNKVLEIKYC PAQDCNYVIE FHQKNHDGAD
201: QEDYGFNVVC LCGHIFCWRC MLESHKPVTC NNASDWLFRD LNSLSKESGE KPLSLSSFET REKTYPLSSI KATKKVCPHC LRPADLGTKQ YLRFLTCACN
301: GRFCWKCMQP EEAHKTESGF YKFCNVSMTF EGRAPKTLEG RAEPENSCVG LWKASEVSLK QAKSDLQAFE ESNIKNPSDL TEKDFTIIRK GLMLIVQCRQ
401: VLKWSCVYDY LHAEYEMSKR EYLRFLQADA TSLVESFSKT LNEEIGRASS ATYENFCCVK HKVTIETSNI GNYFYHFIKT LQEGLDDVKV KSYDDYGGLF
501: WLCDRCTYGN TWFHKECLMC SDDIAARVDL SDMSLN
Arabidopsis Description
ARI13Probable E3 ubiquitin-protein ligase ARI13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.