Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61443 | Canola | nucleus | 90.18 | 85.0 |
| CDX78438 | Canola | nucleus | 63.65 | 65.45 |
| CDX70415 | Canola | nucleus | 63.65 | 61.71 |
| CDY10162 | Canola | nucleus | 64.44 | 59.1 |
| CDY47704 | Canola | nucleus | 63.85 | 58.24 |
| CDX86547 | Canola | nucleus | 63.26 | 58.12 |
| CDY63791 | Canola | nucleus | 63.06 | 58.05 |
| CDY19083 | Canola | nucleus | 61.89 | 56.76 |
| CDX84781 | Canola | nucleus | 61.69 | 56.68 |
| CDY15392 | Canola | nucleus | 61.89 | 56.55 |
| CDY23938 | Canola | nucleus | 60.71 | 55.48 |
| CDY68344 | Canola | nucleus | 52.65 | 53.82 |
| CDX79440 | Canola | cytosol | 17.88 | 53.22 |
| Solyc06g073340.2.1 | Tomato | nucleus | 57.17 | 52.91 |
| PGSC0003DMT400069483 | Potato | nucleus | 57.17 | 52.43 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 56.19 | 51.81 |
| KRH23186 | Soybean | nucleus | 59.73 | 51.61 |
| KRH10154 | Soybean | nucleus | 59.53 | 51.44 |
| KRH24651 | Soybean | nucleus | 58.94 | 51.19 |
| KRH29654 | Soybean | nucleus | 58.55 | 50.85 |
| CDY68345 | Canola | cytosol | 43.81 | 50.8 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 58.55 | 50.77 |
| CDY16406 | Canola | nucleus | 54.42 | 50.64 |
| Os04t0492100-01 | Rice | nucleus | 46.37 | 50.0 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 55.01 | 50.0 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 57.37 | 49.74 |
| EES11042 | Sorghum | nucleus | 57.37 | 49.58 |
| CDY57807 | Canola | nucleus | 54.81 | 49.47 |
| Zm00001d003207_P001 | Maize | nucleus | 57.17 | 49.41 |
| CDX84759 | Canola | nucleus | 50.29 | 49.14 |
| Zm00001d025750_P011 | Maize | extracellular | 56.78 | 49.07 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 56.78 | 49.07 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 56.58 | 49.06 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 56.58 | 48.9 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 56.58 | 48.9 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 28.09 | 48.64 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 55.99 | 48.55 |
| CDY15373 | Canola | nucleus | 51.87 | 48.26 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 55.8 | 48.22 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 55.8 | 48.22 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 55.8 | 48.22 |
| CDY42068 | Canola | nucleus | 43.22 | 48.14 |
| CDY15374 | Canola | nucleus | 53.05 | 47.12 |
| CDX79439 | Canola | nucleus | 29.47 | 45.87 |
| CDY34490 | Canola | cytosol | 10.02 | 41.46 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 53.44 | 40.66 |
| Zm00001d046141_P001 | Maize | cytosol | 19.06 | 34.15 |
| CDY47702 | Canola | cytosol | 33.2 | 32.44 |
| CDY10159 | Canola | cytosol | 33.4 | 32.2 |
| CDX99146 | Canola | nucleus | 23.77 | 27.13 |
| CDY00148 | Canola | nucleus | 24.95 | 26.24 |
| CDX99147 | Canola | nucleus | 17.49 | 25.14 |
| CDX84438 | Canola | cytosol | 17.88 | 24.73 |
| CDY20037 | Canola | nucleus | 24.75 | 24.05 |
| CDY49559 | Canola | nucleus | 27.11 | 23.71 |
| CDY49768 | Canola | nucleus | 21.81 | 23.12 |
| CDX71262 | Canola | nucleus | 26.33 | 23.06 |
| CDY03991 | Canola | nucleus | 21.81 | 22.93 |
| CDY44786 | Canola | nucleus | 21.41 | 22.61 |
| CDX75425 | Canola | nucleus | 26.13 | 22.5 |
| CDY41533 | Canola | nucleus | 23.38 | 22.41 |
| CDX69049 | Canola | nucleus | 26.13 | 22.28 |
| CDY40734 | Canola | nucleus | 20.43 | 21.8 |
| CDY31353 | Canola | nucleus | 18.27 | 20.9 |
| CDY39850 | Canola | nucleus | 18.27 | 20.85 |
| CDY41534 | Canola | nucleus | 7.07 | 19.46 |
| CDX84439 | Canola | nucleus | 22.79 | 17.68 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 22.79 | 17.29 |
| CDY21562 | Canola | nucleus | 22.4 | 17.17 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078DPQ7 | EnsemblPlants:CDX91196 | ProteinID:CDX91196 |
| ProteinID:CDX91196.1 | ncoils:Coil | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00152008001 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 |
| PFAM:PF13445 | ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00647 |
| SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE9FE9 | InterPro:Znf-RING_LisH | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | SEG:seg | : | : | : | : |
Description
BnaC02g04010D
Coordinates
chrLK031865:+:1336247..1337893
Molecular Weight (calculated)
58477.5 Da
IEP (calculated)
5.545
GRAVY (calculated)
-0.664
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDDDMLDT YDEESGEYDL YSDVDDEHGH GGEDDSDHIL EEVVDDSITH GSQINYVVLK EEDIRKRQED EIKQLSTVLS ITNAEASVLL LHYRWNVSKL
101: TDEWFADEDK VRRTVGVLEG GGGSVVVVEN HRKVKCGICF DKFRRKKIVP VACGHTFCST CWNDLRKYLL YFLRSYIEES KKMKWCPAPG CEGAVDFSAS
201: GTSINYDVSC SCSHRFCWNC NEDAHSPVDC DTVSQWILKN SAEAENTAWI LANSKACPKC KRPIEKNHGC MHMTCGPPCK HEFCWLCLGA WRDHGDRTGG
301: FNACNKYEKD KKQGLYDDAE KKRQMAKSSL ERYTHYYERW ASNEKSRGKA FGDLQVFLTE KIAKLSVIQC IPETQLTFVT DAWLQIIECR RVLKWTYAYG
401: YYLPESEREK RCFFEYVQGE AESGLERLHK CVETEVFQGA EERSELEFTA FREKLSNLTS VTKRHFETLV KALENGLADV ESQAACNKET ESLKTEIKSK
501: ETTSKKRRT
101: TDEWFADEDK VRRTVGVLEG GGGSVVVVEN HRKVKCGICF DKFRRKKIVP VACGHTFCST CWNDLRKYLL YFLRSYIEES KKMKWCPAPG CEGAVDFSAS
201: GTSINYDVSC SCSHRFCWNC NEDAHSPVDC DTVSQWILKN SAEAENTAWI LANSKACPKC KRPIEKNHGC MHMTCGPPCK HEFCWLCLGA WRDHGDRTGG
301: FNACNKYEKD KKQGLYDDAE KKRQMAKSSL ERYTHYYERW ASNEKSRGKA FGDLQVFLTE KIAKLSVIQC IPETQLTFVT DAWLQIIECR RVLKWTYAYG
401: YYLPESEREK RCFFEYVQGE AESGLERLHK CVETEVFQGA EERSELEFTA FREKLSNLTS VTKRHFETLV KALENGLADV ESQAACNKET ESLKTEIKSK
501: ETTSKKRRT
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.