Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011524.1-P | Field mustard | nucleus | 99.83 | 99.83 |
| CDX69049 | Canola | nucleus | 98.82 | 97.82 |
| AT4G34370.1 | Thale cress | nucleus | 84.94 | 84.09 |
| CDY49559 | Canola | nucleus | 73.1 | 74.23 |
| CDX71262 | Canola | nucleus | 71.57 | 72.81 |
| VIT_03s0063g02000.t01 | Wine grape | nucleus | 67.17 | 67.4 |
| KRH24517 | Soybean | nucleus | 64.97 | 66.21 |
| KRH29521 | Soybean | nucleus | 64.47 | 65.69 |
| Solyc01g109280.2.1 | Tomato | nucleus | 64.13 | 64.24 |
| PGSC0003DMT400064832 | Potato | nucleus | 63.96 | 64.07 |
| CDY49768 | Canola | nucleus | 50.59 | 62.29 |
| CDY03991 | Canola | nucleus | 50.76 | 61.98 |
| CDY20037 | Canola | nucleus | 53.64 | 60.5 |
| CDY00148 | Canola | nucleus | 48.56 | 59.3 |
| VIT_18s0001g11740.t01 | Wine grape | cytosol | 55.67 | 59.28 |
| EER92613 | Sorghum | nucleus | 59.05 | 57.78 |
| Solyc04g079780.2.1 | Tomato | cytosol | 50.08 | 56.7 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 59.39 | 56.61 |
| TraesCS4B01G236900.1 | Wheat | nucleus | 59.22 | 56.45 |
| Os03t0233500-01 | Rice | nucleus | 58.38 | 56.37 |
| HORVU4Hr1G066180.1 | Barley | nucleus | 59.05 | 56.29 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 59.05 | 56.29 |
| PGSC0003DMT400043486 | Potato | cytosol | 49.58 | 56.24 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 61.08 | 56.14 |
| HORVU1Hr1G018020.1 | Barley | cytosol | 17.26 | 55.43 |
| Zm00001d028285_P003 | Maize | nucleus | 57.87 | 55.16 |
| PGSC0003DMT400039948 | Potato | nucleus | 49.58 | 53.96 |
| Solyc12g089000.1.1 | Tomato | nucleus | 48.22 | 53.07 |
| HORVU7Hr1G068450.2 | Barley | nucleus | 22.17 | 51.17 |
| GSMUA_Achr5P01850_001 | Banana | nucleus | 44.67 | 48.98 |
| Zm00001d048017_P003 | Maize | nucleus | 57.7 | 44.58 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 40.78 | 43.98 |
| TraesCS4B01G071800.1 | Wheat | nucleus | 40.78 | 43.9 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 39.76 | 43.68 |
| EER93790 | Sorghum | nucleus | 39.76 | 43.36 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 38.92 | 43.07 |
| Zm00001d013716_P002 | Maize | nucleus | 38.75 | 42.88 |
| Os03t0625800-01 | Rice | cytosol | 38.92 | 42.59 |
| Os03t0625933-00 | Rice | nucleus | 23.52 | 42.25 |
| TraesCS4B01G071700.1 | Wheat | nucleus | 38.41 | 41.96 |
| EER93787 | Sorghum | nucleus | 36.89 | 40.75 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 36.21 | 40.07 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 35.87 | 39.55 |
| TraesCS4B01G070800.1 | Wheat | nucleus | 35.36 | 38.99 |
| HORVU4Hr1G011910.1 | Barley | cytosol, plastid | 40.1 | 38.73 |
| HORVU4Hr1G011770.1 | Barley | nucleus | 34.86 | 38.36 |
| Os03t0626100-01 | Rice | nucleus | 35.53 | 36.84 |
| CDX79439 | Canola | nucleus | 15.91 | 28.75 |
| CDX84781 | Canola | nucleus | 26.06 | 27.8 |
| CDY68345 | Canola | cytosol | 20.64 | 27.79 |
| CDY47704 | Canola | nucleus | 26.06 | 27.6 |
| CDY10162 | Canola | nucleus | 25.89 | 27.57 |
| CDY63791 | Canola | nucleus | 25.38 | 27.12 |
| CDY23938 | Canola | nucleus | 25.55 | 27.11 |
| CDX86547 | Canola | nucleus | 25.38 | 27.08 |
| CDY16406 | Canola | nucleus | 25.04 | 27.06 |
| CDY19083 | Canola | nucleus | 25.38 | 27.03 |
| CDY15392 | Canola | nucleus | 25.21 | 26.75 |
| CDY57807 | Canola | nucleus | 25.38 | 26.6 |
| CDY68344 | Canola | nucleus | 22.34 | 26.51 |
| CDX84759 | Canola | nucleus | 23.18 | 26.3 |
| CDX78438 | Canola | nucleus | 22.0 | 26.26 |
| CDX91196 | Canola | nucleus | 22.5 | 26.13 |
| CDX70415 | Canola | nucleus | 23.18 | 26.1 |
| CDY61443 | Canola | nucleus | 23.35 | 25.56 |
| CDY15374 | Canola | nucleus | 23.86 | 24.61 |
| CDY42068 | Canola | nucleus | 18.44 | 23.85 |
| CDY15373 | Canola | nucleus | 22.0 | 23.77 |
| CDX99147 | Canola | nucleus | 13.2 | 22.03 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 10.32 | 20.75 |
| CDY47702 | Canola | cytosol | 18.27 | 20.73 |
| CDY10159 | Canola | cytosol | 18.27 | 20.45 |
| CDY34490 | Canola | cytosol | 4.23 | 20.33 |
| CDX84438 | Canola | cytosol | 12.52 | 20.11 |
| CDX99146 | Canola | nucleus | 14.89 | 19.73 |
| CDY40734 | Canola | nucleus | 14.89 | 18.45 |
| CDX79440 | Canola | cytosol | 5.25 | 18.13 |
| CDY44786 | Canola | nucleus | 14.72 | 18.05 |
| CDY41533 | Canola | nucleus | 15.74 | 17.51 |
| CDY39850 | Canola | nucleus | 12.86 | 17.04 |
| CDY31353 | Canola | nucleus | 12.18 | 16.18 |
| CDY21562 | Canola | nucleus | 17.26 | 15.36 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 16.41 | 14.46 |
| CDX84439 | Canola | nucleus | 15.74 | 14.18 |
| CDY41534 | Canola | nucleus | 3.72 | 11.89 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078CEW7 | EnsemblPlants:CDX75425 | ProteinID:CDX75425 |
| ProteinID:CDX75425.1 | ncoils:Coil | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00121313001 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 |
| PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF150 | SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 |
| UniParc:UPI0004EED456 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
BnaA01g02770D
Coordinates
chrLK031804:+:1049077..1052279
Molecular Weight (calculated)
67703.6 Da
IEP (calculated)
5.525
GRAVY (calculated)
-0.622
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDYYTADEE DCYYSSDHDE SLGGIDNDDS EFHAASSKKS TTQVITQESL LAAQREDLLR VMELLSIKEH HARTLLIHYQ WDIEKLISVF VEKGKDCLFS
101: GAGVTVFDSS SLPSSSPNMS CDVCLEDVVA EQMKRMDCGH CFCNDCWTEH FTVQINEGQS KRIRCMAHKC NAICDEDVVR SLVSKKRPDL AEKFDRFLVE
201: SYIEDNKMVK WCPSTPHCGN AIRAEDDKLC EVECSCGLQF CFSCMCQAHS PCSCLMWELW RKKCRDESET VNWITVHTKL CPKCYKPVEK NGGCNLVRCI
301: CGQYFCWLCG GATGKEHTYR SIAGHSCGRY EDDKERQMER AKRDLDRYTH YHHRYKAHTD SSKLEDKLRN TILEKVSNSE KKELKLKDFT WVTNGLNRLF
401: RSRRILSYSY AFAYYMFGEE LFKDEMSSSE REMKKNLFED QQQQLEGNVE KLSQLLEEPF DDFSDDKVMD VRIHVINLSV AVDSLCKKMY ECIENDLLGS
501: LQSGIHNIAP YSSKGIEQAA EFHASWSSSK ALDSSGTSGE TSRPEKASGS RDSEDMVCSS SKKRPRREGS FTNSKVTLLD LNLPADFMDQ N
101: GAGVTVFDSS SLPSSSPNMS CDVCLEDVVA EQMKRMDCGH CFCNDCWTEH FTVQINEGQS KRIRCMAHKC NAICDEDVVR SLVSKKRPDL AEKFDRFLVE
201: SYIEDNKMVK WCPSTPHCGN AIRAEDDKLC EVECSCGLQF CFSCMCQAHS PCSCLMWELW RKKCRDESET VNWITVHTKL CPKCYKPVEK NGGCNLVRCI
301: CGQYFCWLCG GATGKEHTYR SIAGHSCGRY EDDKERQMER AKRDLDRYTH YHHRYKAHTD SSKLEDKLRN TILEKVSNSE KKELKLKDFT WVTNGLNRLF
401: RSRRILSYSY AFAYYMFGEE LFKDEMSSSE REMKKNLFED QQQQLEGNVE KLSQLLEEPF DDFSDDKVMD VRIHVINLSV AVDSLCKKMY ECIENDLLGS
501: LQSGIHNIAP YSSKGIEQAA EFHASWSSSK ALDSSGTSGE TSRPEKASGS RDSEDMVCSS SKKRPRREGS FTNSKVTLLD LNLPADFMDQ N
001: MDDYFSAEEE ACYYSSDQDS LDGIDNEESE LQPLSSKRSN TQVITQESLL AAQREDLLRV MELLSIKEHH ARTLLIHYQW DVEKLFAVFV EKGKDSLFSG
101: AGVTVFDYQY GNSSFPQSSQ MSCDVCMEDL PGDHMTRMDC GHCFCNNCWT EHFTVQINEG QSKRIRCMAH QCNAICDEDI VRSLVSKKRP DLAAKFDRYL
201: LESYIEDNRM VKWCPSTPHC GNAIRAEDDK LCEVECSCGL QFCFSCLCQA HSPCSCLMWE LWRKKCRDES ETINWITVHT KLCPKCYKPV EKNGGCNLVR
301: CICGQCFCWL CGGATGSDHT YRSIAGHSCG RYQDDKEKQM ERAKRDLNRY THYHHRYKAH TDSSKLEDKL RDTIHEKVSK SEKRELKLKD FSWVTNGLDR
401: LFRSRRVLSY SYAFAYYMFG EEMFKDEMTP EEREIKKNLF EDQQQQLESN VEKLSQFLEE PFDEFSNDKV MAIRIQIINL SVAVDTLCKK MYECIENDLL
501: GSLQLGIHNI SPYRSKGIEQ AAQFYASWNS KDADKFQPLD SGTSGVTSRP EQASGSRSSE DTICSSSQKR PKKEGSFLNN KVTLLDLNLP ADFVDQN
101: AGVTVFDYQY GNSSFPQSSQ MSCDVCMEDL PGDHMTRMDC GHCFCNNCWT EHFTVQINEG QSKRIRCMAH QCNAICDEDI VRSLVSKKRP DLAAKFDRYL
201: LESYIEDNRM VKWCPSTPHC GNAIRAEDDK LCEVECSCGL QFCFSCLCQA HSPCSCLMWE LWRKKCRDES ETINWITVHT KLCPKCYKPV EKNGGCNLVR
301: CICGQCFCWL CGGATGSDHT YRSIAGHSCG RYQDDKEKQM ERAKRDLNRY THYHHRYKAH TDSSKLEDKL RDTIHEKVSK SEKRELKLKD FSWVTNGLDR
401: LFRSRRVLSY SYAFAYYMFG EEMFKDEMTP EEREIKKNLF EDQQQQLESN VEKLSQFLEE PFDEFSNDKV MAIRIQIINL SVAVDTLCKK MYECIENDLL
501: GSLQLGIHNI SPYRSKGIEQ AAQFYASWNS KDADKFQPLD SGTSGVTSRP EQASGSRSSE DTICSSSQKR PKKEGSFLNN KVTLLDLNLP ADFVDQN
Arabidopsis Description
ARI1Probable E3 ubiquitin-protein ligase ARI1 [Source:UniProtKB/Swiss-Prot;Acc:Q949V6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.