Factsheet for PGSC0003DMT400043486

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g079780.2.1	Tomato	cytosol	96.55	96.36
PGSC0003DMT400039948	Potato	nucleus	67.56	64.83
VIT_18s0001g11740.t01	Wine grape	cytosol	61.61	57.84
AT2G16090.1	Thale cress	nucleus	60.65	53.29
Bra001960.1-P	Field mustard	nucleus	58.93	52.75
CDY49559	Canola	nucleus	58.93	52.75
CDX71262	Canola	nucleus	58.73	52.67
PGSC0003DMT400064832	Potato	nucleus	59.12	52.2
CDY49768	Canola	nucleus	47.98	52.08
CDY03991	Canola	nucleus	47.41	51.03
Bra033024.1-P	Field mustard	nucleus	51.25	50.76
AT3G27710.1	Thale cress	nucleus	52.02	50.47
AT4G34370.1	Thale cress	nucleus	57.01	49.75
Bra011524.1-P	Field mustard	nucleus	56.24	49.58
CDX75425	Canola	nucleus	56.24	49.58
Bra039068.1-P	Field mustard	nucleus	49.71	49.43
CDY20037	Canola	nucleus	49.52	49.24
CDY00148	Canola	nucleus	45.68	49.17
EER92613	Sorghum	nucleus	57.01	49.17
CDX69049	Canola	nucleus	55.85	48.74
Os03t0233500-01	Rice	nucleus	56.81	48.37
TraesCS4B01G236900.1	Wheat	nucleus	57.39	48.23
TraesCS4D01G238400.2	Wheat	nucleus	57.2	48.06
HORVU4Hr1G066180.1	Barley	nucleus	57.2	48.06
TraesCS4A01G061500.1	Wheat	nucleus	57.01	47.9
GSMUA_Achr6P23120_001	Banana	nucleus	58.73	47.59
GSMUA_Achr5P01850_001	Banana	nucleus	48.94	47.31
Zm00001d028285_P003	Maize	nucleus	55.85	46.94
AT3G27720.1	Thale cress	nucleus	43.57	46.04
HORVU1Hr1G018020.1	Barley	cytosol	15.16	42.93
TraesCS4D01G070400.1	Wheat	nucleus	42.23	41.2
Os03t0625800-01	Rice	cytosol	42.42	40.93
TraesCS4B01G071700.1	Wheat	nucleus	41.27	39.74
EER93790	Sorghum	nucleus	41.27	39.67
Zm00001d013716_P002	Maize	nucleus	40.5	39.51
TraesCS4A01G243200.1	Wheat	nucleus	40.88	38.87
TraesCS4D01G070600.1	Wheat	nucleus	40.12	38.85
TraesCS4B01G071800.1	Wheat	nucleus	40.88	38.8
Zm00001d048017_P003	Maize	nucleus	56.62	38.56
Os03t0625933-00	Rice	nucleus	24.18	38.3
TraesCS4D01G069600.1	Wheat	nucleus	38.96	38.02
EER93787	Sorghum	nucleus	38.77	37.76
TraesCS4A01G244200.1	Wheat	nucleus	37.81	36.75
HORVU7Hr1G068450.2	Barley	nucleus	18.04	36.72
TraesCS4B01G070800.1	Wheat	nucleus	37.62	36.57
HORVU4Hr1G011770.1	Barley	nucleus	37.62	36.5
HORVU4Hr1G011910.1	Barley	cytosol, plastid	40.31	34.31
Os03t0626100-01	Rice	nucleus	37.04	33.86
PGSC0003DMT400069483	Potato	nucleus	28.41	26.67
PGSC0003DMT400038933	Potato	nucleus	24.38	14.51

Protein Annotations

Gene3D:1.20.120.1750	EntrezGene:102590644	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	ncoils:Coil	InterPro:E3_UB_ligase_RBR
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0046872
InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR013083	UniProt:M1BEQ4	PFAM:PF00097	PFAM:PF01485
EnsemblPlantsGene:PGSC0003DMG400016884	PGSC:PGSC0003DMG400016884	EnsemblPlants:PGSC0003DMT400043486	PFscan:PS50089	PANTHER:PTHR11685	PANTHER:PTHR11685:SF150
SMART:SM00647	SUPFAM:SSF57850	UniParc:UPI0002968664	RefSeq:XP_006366446.1	InterPro:Znf_C3HC4_RING-type	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

Protein ariadne-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400016884]

Coordinates

chr4:-:69113921..69117388

Molecular Weight (calculated)

60784.3 Da

IEP (calculated)

4.663

GRAVY (calculated)

-0.620

Length

521 amino acids

Sequence
(BLAST)

001: MDDMYGSDEE YYNGEYEDDY DRDPEPESDD DLSCGKAPSC RVIRKESLLA AQKEDLQRVV DLLSLKEHHA RTLLIHYQWD VDKVFAIFVE RGKERLYVEA
101: GITLEEQNDN PSSDPSTEYT CEICFEDFPD EQTTLMECNH RFCNDCWTEY FIVKINDGKS RRVTCMAQKC KAICDEGKIR DLVTAKDPNL AEKFDRFILE
201: SYIEDNKRVK WCPSVPHCGN AIRVEDDEYC EVECACGQQF CFNCSCELHS PCSCVMWDLW LKKCDDEAPT VNWLSEKTKH CPKCHKIVEK DGGCNLVQCI
301: CGQPFCWLCG EATGFEHTWN SISGHTCGRY KETHLKSEDS VEDYWRLTHY YRRYKAHIDS LKIEASESKK KILDKVHSLE AKEFQLKDFS WAMSGFHRLA
401: LSRRVVACSY PFAYYYFGDL FANEITKEER EIKQNLFEDQ QQQLETNIER LSMFLEEPFG NYAEDKLVET RMKIITLSTV TDDLCKNLYE CIDNDLLVPL
501: QQATHTIVRY RSNGVEKASE L

Best Arabidopsis Sequence Match ( AT2G16090.4 )
(BLAST)

001: MDDNLSGEEE DYYYSSDQES LNGIDNDESV SIPVSSRSNT VKVITKESLL AAQREDLRRV MELLSVKEHH ARTLLIHYRW DVEKLFAVLV EKGKDSLFSG
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGWTSR LDQALESGKS EDTSCSSGKR ARIDESYRNS QTTLLDLNLP AEAIERK

Arabidopsis Description

ARI2Probable E3 ubiquitin-protein ligase ARI2 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.