Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001960.1-P | Field mustard | nucleus | 99.48 | 99.48 |
| CDX71262 | Canola | nucleus | 95.88 | 96.04 |
| AT2G16090.1 | Thale cress | nucleus | 83.51 | 81.96 |
| CDX75425 | Canola | nucleus | 74.23 | 73.1 |
| CDX69049 | Canola | nucleus | 73.88 | 72.03 |
| VIT_03s0063g02000.t01 | Wine grape | nucleus | 70.79 | 69.95 |
| PGSC0003DMT400064832 | Potato | nucleus | 68.9 | 67.97 |
| Solyc01g109280.2.1 | Tomato | nucleus | 68.56 | 67.63 |
| KRH24517 | Soybean | nucleus | 67.01 | 67.24 |
| KRH29521 | Soybean | nucleus | 66.67 | 66.9 |
| VIT_18s0001g11740.t01 | Wine grape | cytosol | 60.31 | 63.24 |
| CDY49768 | Canola | nucleus | 50.34 | 61.04 |
| CDY03991 | Canola | nucleus | 49.83 | 59.92 |
| EER92613 | Sorghum | nucleus | 61.68 | 59.44 |
| CDY20037 | Canola | nucleus | 53.26 | 59.16 |
| PGSC0003DMT400043486 | Potato | cytosol | 52.75 | 58.93 |
| Os03t0233500-01 | Rice | nucleus | 61.68 | 58.66 |
| Solyc04g079780.2.1 | Tomato | cytosol | 52.58 | 58.62 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 62.03 | 58.23 |
| TraesCS4B01G236900.1 | Wheat | nucleus | 61.86 | 58.06 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 61.86 | 58.06 |
| HORVU4Hr1G066180.1 | Barley | nucleus | 61.86 | 58.06 |
| CDY00148 | Canola | nucleus | 48.11 | 57.85 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 63.75 | 57.7 |
| Zm00001d028285_P003 | Maize | nucleus | 61.0 | 57.26 |
| PGSC0003DMT400039948 | Potato | nucleus | 52.41 | 56.17 |
| Solyc12g089000.1.1 | Tomato | nucleus | 51.55 | 55.87 |
| HORVU1Hr1G018020.1 | Barley | cytosol | 17.53 | 55.43 |
| GSMUA_Achr5P01850_001 | Banana | nucleus | 47.59 | 51.39 |
| HORVU7Hr1G068450.2 | Barley | nucleus | 21.82 | 49.61 |
| Zm00001d048017_P003 | Maize | nucleus | 61.0 | 46.41 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 41.58 | 44.16 |
| TraesCS4B01G071800.1 | Wheat | nucleus | 41.58 | 44.08 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 40.38 | 44.01 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 40.55 | 43.87 |
| Os03t0625800-01 | Rice | cytosol | 40.38 | 43.52 |
| TraesCS4B01G071700.1 | Wheat | nucleus | 40.03 | 43.07 |
| EER93790 | Sorghum | nucleus | 39.52 | 42.44 |
| Zm00001d013716_P002 | Maize | nucleus | 38.83 | 42.32 |
| Os03t0625933-00 | Rice | nucleus | 23.37 | 41.34 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 37.29 | 40.64 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 36.94 | 40.11 |
| EER93787 | Sorghum | nucleus | 36.6 | 39.81 |
| TraesCS4B01G070800.1 | Wheat | nucleus | 36.43 | 39.55 |
| HORVU4Hr1G011910.1 | Barley | cytosol, plastid | 41.41 | 39.38 |
| HORVU4Hr1G011770.1 | Barley | nucleus | 35.91 | 38.92 |
| Os03t0626100-01 | Rice | nucleus | 35.91 | 36.67 |
| CDX79439 | Canola | nucleus | 15.64 | 27.83 |
| CDY16406 | Canola | nucleus | 26.12 | 27.79 |
| CDY68345 | Canola | cytosol | 20.79 | 27.56 |
| CDY57807 | Canola | nucleus | 26.63 | 27.48 |
| CDX78438 | Canola | nucleus | 23.37 | 27.47 |
| CDX84781 | Canola | nucleus | 26.12 | 27.44 |
| CDX86547 | Canola | nucleus | 25.95 | 27.26 |
| CDY47704 | Canola | nucleus | 26.12 | 27.24 |
| CDY10162 | Canola | nucleus | 25.95 | 27.21 |
| CDX91196 | Canola | nucleus | 23.71 | 27.11 |
| CDY63791 | Canola | nucleus | 25.6 | 26.94 |
| CDY19083 | Canola | nucleus | 25.6 | 26.85 |
| CDY15392 | Canola | nucleus | 25.6 | 26.75 |
| CDY23938 | Canola | nucleus | 25.6 | 26.75 |
| CDX70415 | Canola | nucleus | 24.05 | 26.67 |
| CDY61443 | Canola | nucleus | 24.57 | 26.48 |
| CDY68344 | Canola | nucleus | 22.34 | 26.1 |
| CDX84759 | Canola | nucleus | 23.2 | 25.91 |
| CDX99147 | Canola | nucleus | 14.43 | 23.73 |
| CDY15373 | Canola | nucleus | 22.16 | 23.58 |
| CDY15374 | Canola | nucleus | 23.02 | 23.39 |
| CDY42068 | Canola | nucleus | 17.87 | 22.76 |
| CDX99146 | Canola | nucleus | 16.32 | 21.3 |
| CDY47702 | Canola | cytosol | 18.9 | 21.11 |
| CDY10159 | Canola | cytosol | 18.9 | 20.83 |
| CDX84438 | Canola | cytosol | 12.89 | 20.38 |
| CDX79440 | Canola | cytosol | 5.67 | 19.3 |
| CDY40734 | Canola | nucleus | 15.46 | 18.87 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 9.45 | 18.71 |
| CDY39850 | Canola | nucleus | 14.26 | 18.61 |
| CDY44786 | Canola | nucleus | 15.29 | 18.46 |
| CDY41533 | Canola | nucleus | 16.84 | 18.46 |
| CDY31353 | Canola | nucleus | 13.57 | 17.75 |
| CDY34490 | Canola | cytosol | 3.44 | 16.26 |
| CDY21562 | Canola | nucleus | 18.38 | 16.11 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 17.18 | 14.9 |
| CDX84439 | Canola | nucleus | 16.67 | 14.79 |
| CDY41534 | Canola | nucleus | 4.12 | 12.97 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078IJK6 | UniProt:A0A078IJK6 | EnsemblPlants:CDY49559 |
| ProteinID:CDY49559 | ProteinID:CDY49559.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00093271001 | InterPro:IBR_dom | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF01485 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF150 | SMART:SM00647 |
| SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EDBCB1 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaA07g03810DBnaA07g03810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJK6]
Coordinates
chrLK032841:-:97987..100655
Molecular Weight (calculated)
66843.7 Da
IEP (calculated)
5.587
GRAVY (calculated)
-0.565
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDYLSGEEE DDYYYTSDQE SLEGLDHDQS NLHPLSSSGN TAKVITKESL LAAQREDLRR VMELLSLKEH HARTLLIHHR WDVEKLFAVL VEKGKDCLFS
101: GAGLTLAGDD PTFSPSSSMM MTCDICVEDV AGHHHMTRMD CGHCFCNNCW AAHFTVKINE GQSKRIRCMA YKCNAICDED VVRSLVSETQ PDLAEKFDRF
201: LIESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG FQFCFSCSYQ AHSPCSCSMW ELWRKKCHDE SETVNWITVH TKPCPKCYKP VEKNGGCNLV
301: TCICGQSFCW LCGGATGRDH TWSSISGHSC GRYQEDKEKQ LERAKRDLYR YMHYHNRYKA HIDSSKLEDR LSNTILEKVS ILEKRQLQFK DFSWVTSGLH
401: RLFRSRRVLS YSYPFAFYMF GEELFKDEMS AEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VTQIRIQVIN LSVAVDTLCK TMYECIENEL
501: LGSLQVGIHN IAPYSSNGIE RASDFISSRE AGGEKCQASN SGWSSEDTSC SPRKRPRKEG IYRNNQTTLL DLNLPADVIE RK
101: GAGLTLAGDD PTFSPSSSMM MTCDICVEDV AGHHHMTRMD CGHCFCNNCW AAHFTVKINE GQSKRIRCMA YKCNAICDED VVRSLVSETQ PDLAEKFDRF
201: LIESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG FQFCFSCSYQ AHSPCSCSMW ELWRKKCHDE SETVNWITVH TKPCPKCYKP VEKNGGCNLV
301: TCICGQSFCW LCGGATGRDH TWSSISGHSC GRYQEDKEKQ LERAKRDLYR YMHYHNRYKA HIDSSKLEDR LSNTILEKVS ILEKRQLQFK DFSWVTSGLH
401: RLFRSRRVLS YSYPFAFYMF GEELFKDEMS AEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VTQIRIQVIN LSVAVDTLCK TMYECIENEL
501: LGSLQVGIHN IAPYSSNGIE RASDFISSRE AGGEKCQASN SGWSSEDTSC SPRKRPRKEG IYRNNQTTLL DLNLPADVIE RK
001: MDDNLSGEEE DYYYSSDQES LNGIDNDESV SIPVSSRSNT VKVITKESLL AAQREDLRRV MELLSVKEHH ARTLLIHYRW DVEKLFAVLV EKGKDSLFSG
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
Arabidopsis Description
ARI2Probable E3 ubiquitin-protein ligase ARI2 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.