Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86547 | Canola | nucleus | 96.93 | 96.75 |
| CDY10162 | Canola | nucleus | 87.52 | 87.21 |
| CDY47704 | Canola | nucleus | 86.98 | 86.2 |
| CDX84781 | Canola | nucleus | 77.4 | 77.26 |
| CDY15392 | Canola | nucleus | 77.76 | 77.2 |
| CDY19083 | Canola | nucleus | 77.4 | 77.12 |
| CDY23938 | Canola | nucleus | 76.85 | 76.3 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 80.65 | 75.08 |
| CDX70415 | Canola | nucleus | 63.47 | 66.86 |
| Solyc06g073340.2.1 | Tomato | nucleus | 66.37 | 66.73 |
| PGSC0003DMT400069483 | Potato | nucleus | 66.73 | 66.49 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 70.16 | 66.1 |
| KRH23186 | Soybean | nucleus | 69.44 | 65.2 |
| KRH10154 | Soybean | nucleus | 69.44 | 65.2 |
| CDY68344 | Canola | nucleus | 58.59 | 65.06 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 65.82 | 65.0 |
| CDX78438 | Canola | nucleus | 58.05 | 64.85 |
| Os04t0492100-01 | Rice | nucleus | 55.15 | 64.62 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 64.2 | 64.31 |
| CDY16406 | Canola | nucleus | 63.47 | 64.17 |
| CDY57807 | Canola | nucleus | 65.28 | 64.01 |
| KRH24651 | Soybean | nucleus | 67.81 | 63.99 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 67.81 | 63.88 |
| CDX79440 | Canola | cytosol | 19.71 | 63.74 |
| EES11042 | Sorghum | nucleus | 67.63 | 63.5 |
| Zm00001d003207_P001 | Maize | nucleus | 67.63 | 63.5 |
| KRH29654 | Soybean | nucleus | 67.27 | 63.48 |
| CDY34490 | Canola | cytosol | 14.1 | 63.41 |
| Zm00001d025750_P011 | Maize | extracellular | 67.45 | 63.33 |
| CDX91196 | Canola | nucleus | 58.05 | 63.06 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 66.91 | 63.03 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 67.09 | 62.99 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 66.73 | 62.86 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 66.91 | 62.82 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 66.91 | 62.82 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 66.91 | 62.82 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 66.91 | 62.82 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 66.73 | 62.65 |
| CDY61443 | Canola | nucleus | 60.04 | 61.48 |
| CDY68345 | Canola | cytosol | 47.02 | 59.23 |
| CDX84759 | Canola | nucleus | 55.52 | 58.93 |
| CDY15373 | Canola | nucleus | 57.5 | 58.14 |
| CDY42068 | Canola | nucleus | 47.56 | 57.55 |
| CDX79439 | Canola | nucleus | 33.82 | 57.19 |
| CDY15374 | Canola | nucleus | 55.33 | 53.4 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 28.21 | 53.06 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 62.21 | 51.42 |
| Zm00001d046141_P001 | Maize | cytosol | 24.95 | 48.59 |
| CDY47702 | Canola | cytosol | 35.8 | 38.0 |
| CDY10159 | Canola | cytosol | 36.17 | 37.88 |
| CDX99146 | Canola | nucleus | 25.14 | 31.17 |
| CDX99147 | Canola | nucleus | 18.44 | 28.81 |
| CDY00148 | Canola | nucleus | 24.77 | 28.31 |
| CDX84438 | Canola | cytosol | 18.81 | 28.26 |
| CDY44786 | Canola | nucleus | 23.33 | 26.76 |
| CDY20037 | Canola | nucleus | 25.32 | 26.72 |
| CDY40734 | Canola | nucleus | 22.78 | 26.42 |
| CDY49768 | Canola | nucleus | 22.6 | 26.04 |
| CDY49559 | Canola | nucleus | 26.94 | 25.6 |
| CDY03991 | Canola | nucleus | 22.24 | 25.41 |
| CDX75425 | Canola | nucleus | 27.12 | 25.38 |
| CDX69049 | Canola | nucleus | 26.94 | 24.96 |
| CDX71262 | Canola | nucleus | 26.22 | 24.96 |
| CDY41533 | Canola | nucleus | 23.15 | 24.11 |
| CDY39850 | Canola | nucleus | 19.17 | 23.77 |
| CDY31353 | Canola | nucleus | 18.81 | 23.37 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 24.41 | 20.12 |
| CDY41534 | Canola | nucleus | 6.69 | 20.0 |
| CDY21562 | Canola | nucleus | 23.87 | 19.88 |
| CDX84439 | Canola | nucleus | 23.33 | 19.66 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078JC28 | UniProt:A0A078JC28 | EnsemblPlants:CDY63791 |
| ProteinID:CDY63791 | ProteinID:CDY63791.1 | ncoils:Coil | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00039637001 | InterPro:IBR_dom |
| InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 |
| SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE6B2A | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g31720DBnaA08g31720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JC28]
Coordinates
chrLK034353:-:12220..16481
Molecular Weight (calculated)
62698.2 Da
IEP (calculated)
4.852
GRAVY (calculated)
-0.653
Length
553 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEDDLLNA HDMESGEEED DFYSGETDDY SEGGEPDYGF VEEDVDDSVM IASHRSQVNY VVLKEEDIRR HQKDDIGQVS MVLSISEVEA SVLLLHYHWS
101: VSKVHDEWFA DEERVRKTVG ILDAPVIVIP TPDDGGELTC GICFETFPPE EILSVACGHP FCCTCWTGYI STTINGGPGC LMLKCPEPSC PAAVGQDMFE
201: KLASKEDKEK YYRYFIRSYV EDNRKMKWCP APGCEHAIDF AAGTGSYDVS CLCSHSFCWN CTEEAHRPVD CETVAQWIRK NSAESENMNW ILANSKPCPK
301: CKRPIEKNHG CMHMTCTPPC KYEFCWLCLN AWTDHGERTG GFYACNKYEA GKQEGRYDEA EKRREMAKNS LERYTHYYER WASNQTSRQK AMVDLEKARS
401: EKIEKLSDIH GTPESQLKCI TEAWLQIIEC RRVLKWTYAY GYYLPDHDKK QFFEYLQGEA ESGLERLHKC VEKELEVFLV AEGPSDDFNH FRTKLTGLTS
501: ITKTYFENLV KALENGLADV DSQGASSKST NTKSSKTNGG GKGKGSSKSP AKT
101: VSKVHDEWFA DEERVRKTVG ILDAPVIVIP TPDDGGELTC GICFETFPPE EILSVACGHP FCCTCWTGYI STTINGGPGC LMLKCPEPSC PAAVGQDMFE
201: KLASKEDKEK YYRYFIRSYV EDNRKMKWCP APGCEHAIDF AAGTGSYDVS CLCSHSFCWN CTEEAHRPVD CETVAQWIRK NSAESENMNW ILANSKPCPK
301: CKRPIEKNHG CMHMTCTPPC KYEFCWLCLN AWTDHGERTG GFYACNKYEA GKQEGRYDEA EKRREMAKNS LERYTHYYER WASNQTSRQK AMVDLEKARS
401: EKIEKLSDIH GTPESQLKCI TEAWLQIIEC RRVLKWTYAY GYYLPDHDKK QFFEYLQGEA ESGLERLHKC VEKELEVFLV AEGPSDDFNH FRTKLTGLTS
501: ITKTYFENLV KALENGLADV DSQGASSKST NTKSSKTNGG GKGKGSSKSP AKT
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.