Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005642.1-P | Field mustard | nucleus | 96.28 | 86.27 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 52.95 | 82.31 |
| CDX79440 | Canola | cytosol | 26.04 | 69.59 |
| CDY68344 | Canola | nucleus | 67.61 | 62.05 |
| CDY68345 | Canola | cytosol | 57.99 | 60.36 |
| CDX84759 | Canola | nucleus | 68.49 | 60.08 |
| CDX79439 | Canola | nucleus | 40.7 | 56.88 |
| CDY15373 | Canola | nucleus | 68.05 | 56.86 |
| CDY15374 | Canola | nucleus | 68.93 | 54.97 |
| AT2G31780.1 | Thale cress | nucleus | 51.64 | 53.27 |
| AT2G31760.1 | Thale cress | nucleus | 59.74 | 53.11 |
| AT2G31770.1 | Thale cress | nucleus | 59.96 | 50.46 |
| CDX84781 | Canola | nucleus | 57.99 | 47.83 |
| CDX86547 | Canola | nucleus | 57.99 | 47.83 |
| CDY63791 | Canola | nucleus | 57.55 | 47.56 |
| CDY15392 | Canola | nucleus | 57.33 | 47.04 |
| CDY19083 | Canola | nucleus | 57.11 | 47.03 |
| CDY23938 | Canola | nucleus | 57.11 | 46.86 |
| CDY47704 | Canola | nucleus | 57.11 | 46.77 |
| CDY10162 | Canola | nucleus | 56.67 | 46.67 |
| CDX70415 | Canola | nucleus | 52.95 | 46.1 |
| CDY61443 | Canola | nucleus | 52.95 | 44.81 |
| PGSC0003DMT400069483 | Potato | nucleus | 54.05 | 44.5 |
| Solyc06g073340.2.1 | Tomato | nucleus | 52.95 | 44.0 |
| CDY34490 | Canola | cytosol | 11.82 | 43.9 |
| CDX78438 | Canola | nucleus | 47.26 | 43.64 |
| CDX91196 | Canola | nucleus | 48.14 | 43.22 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 51.64 | 42.75 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 54.49 | 42.42 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 51.86 | 42.32 |
| CDY57807 | Canola | nucleus | 51.2 | 41.49 |
| CDY16406 | Canola | nucleus | 49.45 | 41.32 |
| KRH24651 | Soybean | nucleus | 52.95 | 41.3 |
| KRH23186 | Soybean | nucleus | 53.17 | 41.26 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 52.95 | 41.23 |
| KRH29654 | Soybean | nucleus | 52.74 | 41.13 |
| KRH10154 | Soybean | nucleus | 52.74 | 40.92 |
| EES11042 | Sorghum | nucleus | 52.52 | 40.75 |
| Zm00001d003207_P001 | Maize | nucleus | 52.3 | 40.58 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 52.08 | 40.41 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 51.86 | 40.24 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 51.64 | 40.2 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 51.64 | 40.07 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 51.64 | 40.07 |
| Zm00001d025750_P011 | Maize | extracellular | 51.64 | 40.07 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 51.64 | 40.07 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 51.42 | 40.03 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 51.42 | 39.9 |
| Os04t0492100-01 | Rice | nucleus | 40.48 | 39.19 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 48.58 | 33.18 |
| Zm00001d046141_P001 | Maize | cytosol | 20.35 | 32.75 |
| CDY47702 | Canola | cytosol | 35.01 | 30.71 |
| CDY10159 | Canola | cytosol | 35.01 | 30.3 |
| CDX84438 | Canola | cytosol | 21.01 | 26.09 |
| CDX99146 | Canola | nucleus | 24.07 | 24.66 |
| CDX99147 | Canola | nucleus | 17.07 | 22.03 |
| CDY40734 | Canola | nucleus | 22.54 | 21.59 |
| CDY44786 | Canola | nucleus | 22.54 | 21.37 |
| CDY20037 | Canola | nucleus | 22.54 | 19.66 |
| CDY00148 | Canola | nucleus | 20.79 | 19.63 |
| CDY41533 | Canola | nucleus | 22.54 | 19.4 |
| CDY49768 | Canola | nucleus | 19.91 | 18.96 |
| CDY03991 | Canola | nucleus | 19.69 | 18.59 |
| CDX75425 | Canola | nucleus | 23.85 | 18.44 |
| CDX69049 | Canola | nucleus | 23.85 | 18.26 |
| CDY39850 | Canola | nucleus | 17.51 | 17.94 |
| CDY49559 | Canola | nucleus | 22.76 | 17.87 |
| CDX71262 | Canola | nucleus | 22.54 | 17.73 |
| CDY31353 | Canola | nucleus | 16.85 | 17.3 |
| CDY41534 | Canola | nucleus | 6.78 | 16.76 |
| CDY21562 | Canola | nucleus | 23.19 | 15.96 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 23.41 | 15.95 |
| CDX84439 | Canola | nucleus | 22.76 | 15.85 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078HZC3 | UniProt:A0A078HZC3 | EnsemblPlants:CDY42068 |
| ProteinID:CDY42068 | ProteinID:CDY42068.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00074107001 | InterPro:IBR_dom | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF01485 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00647 |
| SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE8C7D | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaA05g11180DBnaA05g11180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZC3]
Coordinates
chrLK032514:+:27693..29670
Molecular Weight (calculated)
53395.0 Da
IEP (calculated)
4.899
GRAVY (calculated)
-0.608
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYSDDDGML NIESGEENLY IDHTSEADYG MEEDMHNDST SKRDQISYIV LKEEDIREHQ KTDIKQISTV LSINQVEAII LLLHYQWSSS KVEDEWFTSE
101: ERVRKTVGML KEHMVDLNDQ DVNIGCGICF ESYLRKEIAT VSCGHPYCKT CWTSYITEKI NNGPGCLMIK CPEPSCYAVV GQDMIDKLIT IEEDKEKYCR
201: YFLRSYVKEG KNNIKWCPSP GCVYAVDFGT RNGTENYVVT CLCSYDFCWN CSEDAHRPVN CDMVLVRTAT VISRRTRDVT GDDETKVKRK RAKRVKRTID
301: RYMHYYVRWA NNQSSRLNAM EDLKELQAVQ LEKLSVKQCF SQTQLQFTVD AWLQIIECRR VLKWTYAYGY YIPREERTKK QFFEYLQGEA EVGLERLHHC
401: AEEELQHFVD ETDDPSTDFD DFRKKLIGLT KVTKTYFENL VKALENDLAD VAVDDSK
101: ERVRKTVGML KEHMVDLNDQ DVNIGCGICF ESYLRKEIAT VSCGHPYCKT CWTSYITEKI NNGPGCLMIK CPEPSCYAVV GQDMIDKLIT IEEDKEKYCR
201: YFLRSYVKEG KNNIKWCPSP GCVYAVDFGT RNGTENYVVT CLCSYDFCWN CSEDAHRPVN CDMVLVRTAT VISRRTRDVT GDDETKVKRK RAKRVKRTID
301: RYMHYYVRWA NNQSSRLNAM EDLKELQAVQ LEKLSVKQCF SQTQLQFTVD AWLQIIECRR VLKWTYAYGY YIPREERTKK QFFEYLQGEA EVGLERLHHC
401: AEEELQHFVD ETDDPSTDFD DFRKKLIGLT KVTKTYFENL VKALENDLAD VAVDDSK
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.