Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15392 | Canola | nucleus | 98.2 | 97.85 |
| Bra021726.1-P | Field mustard | nucleus | 88.29 | 97.61 |
| CDX84781 | Canola | nucleus | 94.95 | 95.13 |
| CDY23938 | Canola | nucleus | 93.87 | 93.54 |
| AT2G31510.1 | Thale cress | nucleus | 93.15 | 91.99 |
| CDY47704 | Canola | nucleus | 79.1 | 78.67 |
| CDY34490 | Canola | cytosol | 17.3 | 78.05 |
| CDY10162 | Canola | nucleus | 78.02 | 78.02 |
| CDX86547 | Canola | nucleus | 77.3 | 77.44 |
| CDY63791 | Canola | nucleus | 77.12 | 77.4 |
| Solyc06g073340.2.1 | Tomato | nucleus | 70.99 | 71.64 |
| PGSC0003DMT400069483 | Potato | nucleus | 71.35 | 71.35 |
| KRH10154 | Soybean | nucleus | 74.95 | 70.63 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 74.59 | 70.53 |
| KRH23186 | Soybean | nucleus | 74.77 | 70.46 |
| Os04t0492100-01 | Rice | nucleus | 58.74 | 69.07 |
| KRH29654 | Soybean | nucleus | 72.43 | 68.6 |
| KRH24651 | Soybean | nucleus | 71.89 | 68.09 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 68.47 | 67.86 |
| EES11042 | Sorghum | nucleus | 71.71 | 67.57 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 71.71 | 67.57 |
| Zm00001d003207_P001 | Maize | nucleus | 71.53 | 67.4 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 71.17 | 67.29 |
| Zm00001d025750_P011 | Maize | extracellular | 71.35 | 67.23 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 71.35 | 67.23 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 66.85 | 67.21 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 71.17 | 67.06 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 71.17 | 67.06 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 71.17 | 67.06 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 71.17 | 67.06 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 70.63 | 66.78 |
| CDX79440 | Canola | cytosol | 20.54 | 66.67 |
| CDY16406 | Canola | nucleus | 65.41 | 66.36 |
| CDY57807 | Canola | nucleus | 66.85 | 65.78 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 69.55 | 65.76 |
| CDY68344 | Canola | nucleus | 57.12 | 63.65 |
| CDX70415 | Canola | nucleus | 60.18 | 63.62 |
| CDX91196 | Canola | nucleus | 56.76 | 61.89 |
| CDX78438 | Canola | nucleus | 55.14 | 61.82 |
| CDY68345 | Canola | cytosol | 48.29 | 61.05 |
| CDY61443 | Canola | nucleus | 59.1 | 60.74 |
| CDX84759 | Canola | nucleus | 55.14 | 58.73 |
| CDY15373 | Canola | nucleus | 57.12 | 57.95 |
| CDY42068 | Canola | nucleus | 47.03 | 57.11 |
| CDX79439 | Canola | nucleus | 32.97 | 55.96 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 66.31 | 55.01 |
| CDY15374 | Canola | nucleus | 56.04 | 54.28 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 27.93 | 52.72 |
| Zm00001d046141_P001 | Maize | cytosol | 25.59 | 50.0 |
| CDY47702 | Canola | cytosol | 37.12 | 39.54 |
| CDY10159 | Canola | cytosol | 37.12 | 39.02 |
| CDX99146 | Canola | nucleus | 24.5 | 30.49 |
| CDX84438 | Canola | cytosol | 18.74 | 28.26 |
| CDX99147 | Canola | nucleus | 18.02 | 28.25 |
| CDY00148 | Canola | nucleus | 22.88 | 26.24 |
| CDY40734 | Canola | nucleus | 22.52 | 26.21 |
| CDY44786 | Canola | nucleus | 22.7 | 26.14 |
| CDY49559 | Canola | nucleus | 26.85 | 25.6 |
| CDY20037 | Canola | nucleus | 24.14 | 25.57 |
| CDX75425 | Canola | nucleus | 27.03 | 25.38 |
| CDX71262 | Canola | nucleus | 26.31 | 25.13 |
| CDY03991 | Canola | nucleus | 21.8 | 25.0 |
| CDY49768 | Canola | nucleus | 21.62 | 25.0 |
| CDX69049 | Canola | nucleus | 26.85 | 24.96 |
| CDY31353 | Canola | nucleus | 19.1 | 23.82 |
| CDY41533 | Canola | nucleus | 22.7 | 23.73 |
| CDY39850 | Canola | nucleus | 18.92 | 23.54 |
| CDY41534 | Canola | nucleus | 7.03 | 21.08 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 24.32 | 20.12 |
| CDX84439 | Canola | nucleus | 23.24 | 19.66 |
| CDY21562 | Canola | nucleus | 23.42 | 19.58 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078G358 | UniProt:A0A078G358 | EnsemblPlants:CDY19083 |
| ProteinID:CDY19083 | ProteinID:CDY19083.1 | ncoils:Coil | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00006358001 | InterPro:IBR_dom |
| InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 |
| SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE28E6 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g18230DBnaA04g18230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G358]
Coordinates
chrLK032092:+:184224..188644
Molecular Weight (calculated)
63401.8 Da
IEP (calculated)
4.757
GRAVY (calculated)
-0.671
Length
555 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEEDMLDA HDVYSGEDDF YSDDYKDSDD DDDDGEPDYG FVEEDADDSA MIASHRSQKN FCVLKEEDIL KHQMDAIERV SVVLSITEVE ASVLLRYYHW
101: SVGKVHDEWF ADEERVRKTV GILERPVVPP SDDTELTCGI CFDPFPPEKI ASVSCGHPFC TTCWTGYIST TINDGPGCLM LRCPDPSCLA AVGHDMVDKF
201: VSEEDKDKYN RYFLRSYIED NRKMKWCPAP GCEYAIDFVA GSGNYDVSCL CSFSFCWNCT EEAHRPVDCS TVSKWILKNS AESENMNWIL ANSKPCPRCK
301: RPIEKNQGCM HMTCTPPCKY EFCWLCLGAW MDHGERTGGF YACNRYEVAK QEGQYDETER RREMAKNSLE RYTHYYERWA SNQTSRQKAM TDLQQLQTHN
401: LEKLSDKQCT PESQLKFILE AWLQIIECRR VLKWTYAYGY YLPDHEHAKR QFFEYLQGEA ESGLERLHQC VEKDLLQFLN ADGPSKDFND FRTKLAGLTS
501: VTKNYFENLV KALENGLADV DSHAACSSKS TSSKSTGCSS KTRGKGKGSS RTGGS
101: SVGKVHDEWF ADEERVRKTV GILERPVVPP SDDTELTCGI CFDPFPPEKI ASVSCGHPFC TTCWTGYIST TINDGPGCLM LRCPDPSCLA AVGHDMVDKF
201: VSEEDKDKYN RYFLRSYIED NRKMKWCPAP GCEYAIDFVA GSGNYDVSCL CSFSFCWNCT EEAHRPVDCS TVSKWILKNS AESENMNWIL ANSKPCPRCK
301: RPIEKNQGCM HMTCTPPCKY EFCWLCLGAW MDHGERTGGF YACNRYEVAK QEGQYDETER RREMAKNSLE RYTHYYERWA SNQTSRQKAM TDLQQLQTHN
401: LEKLSDKQCT PESQLKFILE AWLQIIECRR VLKWTYAYGY YLPDHEHAKR QFFEYLQGEA ESGLERLHQC VEKDLLQFLN ADGPSKDFND FRTKLAGLTS
501: VTKNYFENLV KALENGLADV DSHAACSSKS TSSKSTGCSS KTRGKGKGSS RTGGS
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.