Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021742.1-P | Field mustard | nucleus | 98.39 | 98.39 |
| CDY15373 | Canola | nucleus | 91.77 | 83.55 |
| CDY68345 | Canola | cytosol | 64.26 | 72.89 |
| CDX79439 | Canola | nucleus | 44.98 | 68.5 |
| CDX84759 | Canola | nucleus | 71.08 | 67.95 |
| CDX79440 | Canola | cytosol | 23.29 | 67.84 |
| CDY42068 | Canola | nucleus | 62.05 | 67.61 |
| CDY15374 | Canola | nucleus | 75.9 | 65.97 |
| AT2G31780.1 | Thale cress | nucleus | 58.03 | 65.24 |
| AT2G31760.1 | Thale cress | nucleus | 66.47 | 64.4 |
| AT2G31770.1 | Thale cress | nucleus | 66.87 | 61.33 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 35.94 | 60.88 |
| CDY63791 | Canola | nucleus | 65.06 | 58.59 |
| CDX86547 | Canola | nucleus | 64.86 | 58.3 |
| CDX84781 | Canola | nucleus | 64.26 | 57.76 |
| CDY15392 | Canola | nucleus | 64.26 | 57.45 |
| CDY19083 | Canola | nucleus | 63.65 | 57.12 |
| CDY23938 | Canola | nucleus | 63.86 | 57.09 |
| CDY10162 | Canola | nucleus | 63.05 | 56.58 |
| CDY47704 | Canola | nucleus | 63.25 | 56.45 |
| CDX70415 | Canola | nucleus | 58.63 | 55.62 |
| CDX78438 | Canola | nucleus | 53.61 | 53.94 |
| PGSC0003DMT400069483 | Potato | nucleus | 58.84 | 52.79 |
| Solyc06g073340.2.1 | Tomato | nucleus | 58.23 | 52.73 |
| CDX91196 | Canola | nucleus | 53.82 | 52.65 |
| CDY61443 | Canola | nucleus | 56.43 | 52.04 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 56.83 | 51.27 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 57.63 | 51.25 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 59.64 | 50.6 |
| Zm00001d003207_P001 | Maize | nucleus | 59.64 | 50.42 |
| EES11042 | Sorghum | nucleus | 59.64 | 50.42 |
| Zm00001d025750_P011 | Maize | extracellular | 59.24 | 50.08 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 59.24 | 50.08 |
| Os04t0492100-01 | Rice | nucleus | 47.39 | 50.0 |
| KRH23186 | Soybean | nucleus | 59.04 | 49.92 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 59.04 | 49.92 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 59.04 | 49.92 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 58.84 | 49.91 |
| CDY16406 | Canola | nucleus | 54.62 | 49.73 |
| KRH29654 | Soybean | nucleus | 58.43 | 49.66 |
| KRH10154 | Soybean | nucleus | 58.63 | 49.58 |
| KRH24651 | Soybean | nucleus | 58.23 | 49.49 |
| CDY57807 | Canola | nucleus | 56.02 | 49.47 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 58.23 | 49.24 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 57.83 | 49.06 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 57.83 | 48.9 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 57.63 | 48.89 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 57.63 | 48.73 |
| CDY34490 | Canola | cytosol | 11.65 | 47.15 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 55.22 | 41.11 |
| Zm00001d046141_P001 | Maize | cytosol | 23.29 | 40.85 |
| CDY47702 | Canola | cytosol | 36.95 | 35.32 |
| CDY10159 | Canola | cytosol | 37.15 | 35.04 |
| CDX99146 | Canola | nucleus | 26.71 | 29.82 |
| CDX99147 | Canola | nucleus | 20.08 | 28.25 |
| CDX84438 | Canola | cytosol | 19.68 | 26.63 |
| CDY00148 | Canola | nucleus | 25.5 | 26.24 |
| CDY20037 | Canola | nucleus | 26.71 | 25.38 |
| CDY44786 | Canola | nucleus | 23.49 | 24.27 |
| CDY49768 | Canola | nucleus | 23.29 | 24.17 |
| CDY40734 | Canola | nucleus | 23.09 | 24.11 |
| CDY03991 | Canola | nucleus | 23.09 | 23.76 |
| CDY41533 | Canola | nucleus | 24.3 | 22.79 |
| CDY39850 | Canola | nucleus | 20.08 | 22.42 |
| CDX71262 | Canola | nucleus | 26.1 | 22.38 |
| CDY49559 | Canola | nucleus | 26.1 | 22.34 |
| CDX75425 | Canola | nucleus | 26.51 | 22.34 |
| CDX69049 | Canola | nucleus | 26.51 | 22.11 |
| CDY31353 | Canola | nucleus | 19.28 | 21.57 |
| CDY41534 | Canola | nucleus | 7.43 | 20.0 |
| CDY21562 | Canola | nucleus | 25.5 | 19.13 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 25.5 | 18.93 |
| CDX84439 | Canola | nucleus | 24.3 | 18.45 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078JNK7 | UniProt:A0A078JNK7 | EnsemblPlants:CDY68344 |
| ProteinID:CDY68344 | ProteinID:CDY68344.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00073496001 | InterPro:IBR_dom | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF01485 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00647 |
| SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EEAD89 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaAnng26970DBnaAnng26970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNK7]
Coordinates
chrLK037206:-:621..2422
Molecular Weight (calculated)
57654.6 Da
IEP (calculated)
4.707
GRAVY (calculated)
-0.568
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYSDDDVML DIESGEDNLY SDDVDPGFAE EDNDNDSASQ LSYVILKEED IHEHQRTDIE QVSTLLSISQ AEAIVLLLHY QWNASKVEDE WFTDEERVRK
101: TVGIVKEPVV DLNQMNIICG ICFESYFQKD IATVSCGHPY CMTCWNGYIT AKITGGPGCL MVTCPEPSCS AVVGQDMIDK LISNEEYKEK YYRYFFRSYV
201: ESSGKKIKWC PSPGCEYAVD FGRGSENYDV SCLCSNDFCW NCSEDAHRPV DCDTVAKWIF KNNDESENTT WILANTKPCP KCKRHIEKNQ GCSHMTCSAP
301: CRFQFCWICL RAYPCPEDCN KFKGDDEAEN KREMAKTALR RYMHYYERWV SNQSSRLTAK RDLEKLQSVQ LKQLSDKHST PEAQLQFIVD AWLQIIECRR
401: VLKWTFAYGY YLPQHEHAKK QFFEYLQAEA QVGLERLHDC AEVEFKQFVS ETEEPSKDFS DFRRKLTGLT IVTKTYFENL VKALENGLAD VESTMRAK
101: TVGIVKEPVV DLNQMNIICG ICFESYFQKD IATVSCGHPY CMTCWNGYIT AKITGGPGCL MVTCPEPSCS AVVGQDMIDK LISNEEYKEK YYRYFFRSYV
201: ESSGKKIKWC PSPGCEYAVD FGRGSENYDV SCLCSNDFCW NCSEDAHRPV DCDTVAKWIF KNNDESENTT WILANTKPCP KCKRHIEKNQ GCSHMTCSAP
301: CRFQFCWICL RAYPCPEDCN KFKGDDEAEN KREMAKTALR RYMHYYERWV SNQSSRLTAK RDLEKLQSVQ LKQLSDKHST PEAQLQFIVD AWLQIIECRR
401: VLKWTFAYGY YLPQHEHAKK QFFEYLQAEA QVGLERLHDC AEVEFKQFVS ETEEPSKDFS DFRRKLTGLT IVTKTYFENL VKALENGLAD VESTMRAK
001: MDYSDDDMID NESGEENNSD GGGNESYNYN AAVDTIILSE KSYVIIKEEE ILKLQRDDIE RVSTILFLSQ VEAIVLLLHY HWCVSKLEDE WFTDEERIRK
101: TVGILKEPVV DVNGTEVDIQ CGICFESYTR KEIASVSCGH PYCKTCWTGY ITTKIEDGPG CLRVKCPEPS CYAVVGQDMI DEVTEKKDKD KYYRYFLRSY
201: VEDGKKMKWC PSPGCECAVE FGESSGYDVA CLCSYRFCWN CSEDAHSPVD CETVSKWIFK NQDESENKNW ILANSKPCPK CKRPIEKSHG CNHMTCSASC
301: GHRFCWICGK SYSDHYACNN YVEDADHDKR TLLQSEIKRY THYYVRWVEN QSSRLKAMSD LEKFQSVQLK QLSDNQCKPK IDLQFIVDAW LQIIECRRVL
401: KWTYAYGYYL DNLAKRPLFE YLQGEAETGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTKVTK TYFDNLVKAL ENGLADVTKS SEESADFLET
501: QKLYDAYISE GCFF
101: TVGILKEPVV DVNGTEVDIQ CGICFESYTR KEIASVSCGH PYCKTCWTGY ITTKIEDGPG CLRVKCPEPS CYAVVGQDMI DEVTEKKDKD KYYRYFLRSY
201: VEDGKKMKWC PSPGCECAVE FGESSGYDVA CLCSYRFCWN CSEDAHSPVD CETVSKWIFK NQDESENKNW ILANSKPCPK CKRPIEKSHG CNHMTCSASC
301: GHRFCWICGK SYSDHYACNN YVEDADHDKR TLLQSEIKRY THYYVRWVEN QSSRLKAMSD LEKFQSVQLK QLSDNQCKPK IDLQFIVDAW LQIIECRRVL
401: KWTYAYGYYL DNLAKRPLFE YLQGEAETGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTKVTK TYFDNLVKAL ENGLADVTKS SEESADFLET
501: QKLYDAYISE GCFF
Arabidopsis Description
ARI10Probable E3 ubiquitin-protein ligase ARI10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.