Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P28870_001 | Banana | nucleus | 87.05 | 87.05 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 82.62 | 86.61 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 79.05 | 84.06 |
| Os04t0492100-01 | Rice | nucleus | 64.4 | 80.08 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 76.66 | 76.4 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 76.66 | 76.4 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 76.66 | 76.4 |
| EES11042 | Sorghum | nucleus | 76.49 | 76.23 |
| Zm00001d003207_P001 | Maize | nucleus | 75.98 | 75.72 |
| Zm00001d025750_P011 | Maize | extracellular | 75.98 | 75.72 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 75.81 | 75.55 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 75.47 | 75.47 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 75.13 | 74.87 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 74.96 | 74.7 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 74.28 | 74.28 |
| KRH23186 | Soybean | nucleus | 72.74 | 72.5 |
| Bra021726.1-P | Field mustard | nucleus | 61.84 | 72.31 |
| KRH10154 | Soybean | nucleus | 72.4 | 72.16 |
| Solyc06g073340.2.1 | Tomato | nucleus | 67.46 | 72.0 |
| KRH29654 | Soybean | nucleus | 71.55 | 71.67 |
| PGSC0003DMT400069483 | Potato | nucleus | 67.63 | 71.53 |
| KRH24651 | Soybean | nucleus | 71.04 | 71.16 |
| AT2G31510.1 | Thale cress | nucleus | 67.12 | 70.11 |
| Bra022845.1-P | Field mustard | nucleus | 65.76 | 69.8 |
| CDX84781 | Canola | nucleus | 65.76 | 69.68 |
| CDY19083 | Canola | nucleus | 65.76 | 69.55 |
| CDY15392 | Canola | nucleus | 65.76 | 69.3 |
| CDY23938 | Canola | nucleus | 65.25 | 68.76 |
| CDY47704 | Canola | nucleus | 64.05 | 67.38 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 58.77 | 67.38 |
| CDX86547 | Canola | nucleus | 63.54 | 67.33 |
| Bra015463.1-P | Field mustard | nucleus | 63.88 | 67.2 |
| CDY10162 | Canola | nucleus | 63.37 | 67.03 |
| CDY63791 | Canola | nucleus | 63.03 | 66.91 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 71.55 | 62.78 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 63.03 | 62.29 |
| CDY34490 | Canola | cytosol | 12.44 | 59.35 |
| CDY68344 | Canola | nucleus | 48.89 | 57.63 |
| CDX79440 | Canola | cytosol | 16.7 | 57.31 |
| Bra021742.1-P | Field mustard | nucleus | 48.55 | 57.23 |
| CDX70415 | Canola | nucleus | 50.94 | 56.95 |
| Bra023338.1-P | Field mustard | nucleus | 53.32 | 56.7 |
| CDX91196 | Canola | nucleus | 49.06 | 56.58 |
| Bra006112.1-P | Field mustard | nucleus | 51.11 | 56.18 |
| CDY68345 | Canola | cytosol | 41.91 | 56.04 |
| CDY61443 | Canola | nucleus | 51.45 | 55.93 |
| CDX78438 | Canola | nucleus | 47.02 | 55.76 |
| AT2G31780.1 | Thale cress | nucleus | 40.72 | 53.95 |
| Bra005642.1-P | Field mustard | nucleus | 46.17 | 53.14 |
| AT2G31760.1 | Thale cress | nucleus | 46.51 | 53.11 |
| CDX84759 | Canola | nucleus | 47.02 | 52.98 |
| Bra022865.1-P | Field mustard | nucleus | 47.02 | 52.98 |
| CDY15373 | Canola | nucleus | 48.72 | 52.29 |
| Zm00001d046141_P001 | Maize | cytosol | 25.21 | 52.11 |
| CDY42068 | Canola | nucleus | 40.03 | 51.42 |
| AT2G31770.1 | Thale cress | nucleus | 47.36 | 51.2 |
| CDY15374 | Canola | nucleus | 49.4 | 50.61 |
| CDX79439 | Canola | nucleus | 28.11 | 50.46 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 22.66 | 45.24 |
| GSMUA_Achr5P01850_001 | Banana | nucleus | 25.55 | 27.83 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 24.87 | 22.71 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr3G16920_001 | EnsemblPlants:GSMUA_Achr3P16920_001 |
| EnsemblPlants:GSMUA_Achr3T16920_001 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR001876 | InterPro:IPR013083 | UniProt:M0SFA8 |
| PFAM:PF00097 | PFAM:PF01485 | ScanProsite:PS01358 | PFscan:PS50089 | PFscan:PS50199 | PANTHER:PTHR11685 |
| PANTHER:PTHR11685:SF177 | SMART:SM00547 | SMART:SM00647 | SUPFAM:SSF57850 | SUPFAM:SSF90209 | UniParc:UPI0002967ADF |
| InterPro:Znf_C3HC4_RING-type | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | SEG:seg |
Description
Probable E3 ubiquitin-protein ligase ARI8 [Source:GMGC_GENE;Acc:GSMUA_Achr3G16920_001]
Coordinates
chr3:-:18149489..18170602
Molecular Weight (calculated)
67178.2 Da
IEP (calculated)
5.050
GRAVY (calculated)
-0.669
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDDDMLDA NDVQSVDDDF YGGETGIGSD DEDFDYDFVD NESDDYDDVT SRQQQNYTIL SETDIRQHQW EDISTVSTVL SIPRYAASIL LRHYNWSISR
101: VHDEWFVDEE HVRKAVGFLE KPVEMMNARE LTCGICFENY PRDSMSSASC GHPFCRACWR GYISTSISDG PGCLMLRCPD PSCGAAVGQN MVDVLAPEED
201: KDKYSRYLLR SYVEDNRKIK WCPAPGCEFA VKFVMGSGSY DICCFCSYSF CWNCTEEAHR PVDCDTVAKW ILKNSAESEN MNWILANSKP CPKCKRPIEK
301: NQGCMHITCT PPCKFEFCWL CLGPWSDHGE RTGGFYACNR YEAAKQEGVY DESERRKEMA KNSLERYTHY YERWATNQSS RQKALADLHT MQTEKLEKLS
401: NGQSQPESQL KFIIEAWLQI VECRRVLKWT YAYGYYLPEH EHAKRRFFEY LQGEAESGLE RLHQCVEKEL QVYLDAESPV DNFNEFRTKL AGLTSVTRNY
501: FENLVRALET GLKDVGSSNS QTTCTQGLSS KILGNKSKGG KIKTAGTSSG SGAPTHNLDN INFWSCDHCT YANPRSTNTC HMCEHRR
101: VHDEWFVDEE HVRKAVGFLE KPVEMMNARE LTCGICFENY PRDSMSSASC GHPFCRACWR GYISTSISDG PGCLMLRCPD PSCGAAVGQN MVDVLAPEED
201: KDKYSRYLLR SYVEDNRKIK WCPAPGCEFA VKFVMGSGSY DICCFCSYSF CWNCTEEAHR PVDCDTVAKW ILKNSAESEN MNWILANSKP CPKCKRPIEK
301: NQGCMHITCT PPCKFEFCWL CLGPWSDHGE RTGGFYACNR YEAAKQEGVY DESERRKEMA KNSLERYTHY YERWATNQSS RQKALADLHT MQTEKLEKLS
401: NGQSQPESQL KFIIEAWLQI VECRRVLKWT YAYGYYLPEH EHAKRRFFEY LQGEAESGLE RLHQCVEKEL QVYLDAESPV DNFNEFRTKL AGLTSVTRNY
501: FENLVRALET GLKDVGSSNS QTTCTQGLSS KILGNKSKGG KIKTAGTSSG SGAPTHNLDN INFWSCDHCT YANPRSTNTC HMCEHRR
001: MEADDDFYSG TENYSDYADS DEDDADGEYE FVDDAADDSD DLIFRRRQQN YSVLSEADIC KLQEDDISRI STVLSISRNS SAILLRHYNW CVSRVHDEWF
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR
Arabidopsis Description
ARI8ATARI8 [Source:UniProtKB/TrEMBL;Acc:A0A178WLP2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.