Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023338.1-P | Field mustard | nucleus | 98.33 | 96.2 |
| CDX91196 | Canola | nucleus | 85.0 | 90.18 |
| CDX70415 | Canola | nucleus | 62.78 | 64.57 |
| CDX78438 | Canola | nucleus | 57.96 | 63.23 |
| CDY10162 | Canola | nucleus | 62.78 | 61.08 |
| CDX86547 | Canola | nucleus | 61.85 | 60.29 |
| CDY47704 | Canola | nucleus | 62.22 | 60.22 |
| CDY63791 | Canola | nucleus | 61.48 | 60.04 |
| CDY19083 | Canola | nucleus | 60.74 | 59.1 |
| CDY15392 | Canola | nucleus | 60.37 | 58.53 |
| CDX84781 | Canola | nucleus | 60.0 | 58.48 |
| CDY23938 | Canola | nucleus | 58.89 | 57.09 |
| CDY68344 | Canola | nucleus | 52.04 | 56.43 |
| Solyc06g073340.2.1 | Tomato | nucleus | 56.11 | 55.09 |
| PGSC0003DMT400069483 | Potato | nucleus | 56.48 | 54.95 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 55.56 | 54.35 |
| CDY68345 | Canola | cytosol | 44.07 | 54.21 |
| KRH24651 | Soybean | nucleus | 58.7 | 54.1 |
| KRH29654 | Soybean | nucleus | 58.33 | 53.75 |
| CDX79440 | Canola | cytosol | 16.85 | 53.22 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 57.78 | 53.15 |
| KRH23186 | Soybean | nucleus | 57.78 | 52.97 |
| KRH10154 | Soybean | nucleus | 57.78 | 52.97 |
| CDY42068 | Canola | nucleus | 44.81 | 52.95 |
| CDY16406 | Canola | nucleus | 53.52 | 52.83 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 54.44 | 52.5 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 56.67 | 52.13 |
| Os04t0492100-01 | Rice | nucleus | 45.37 | 51.91 |
| CDY57807 | Canola | nucleus | 54.07 | 51.77 |
| EES11042 | Sorghum | nucleus | 56.3 | 51.61 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 55.93 | 51.45 |
| Zm00001d003207_P001 | Maize | nucleus | 56.11 | 51.44 |
| CDX84759 | Canola | nucleus | 49.63 | 51.44 |
| Zm00001d025750_P011 | Maize | extracellular | 55.93 | 51.27 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 55.93 | 51.27 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 55.74 | 51.1 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 55.74 | 51.1 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 55.37 | 50.76 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 55.0 | 50.6 |
| CDY15373 | Canola | nucleus | 51.11 | 50.46 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 54.81 | 50.25 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 54.81 | 50.25 |
| CDX79439 | Canola | nucleus | 30.19 | 49.85 |
| CDY15374 | Canola | nucleus | 52.78 | 49.74 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 26.11 | 47.96 |
| CDY34490 | Canola | cytosol | 9.81 | 43.09 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 52.78 | 42.6 |
| Zm00001d046141_P001 | Maize | cytosol | 19.44 | 36.97 |
| CDY47702 | Canola | cytosol | 32.78 | 33.97 |
| CDY10159 | Canola | cytosol | 33.15 | 33.9 |
| CDX99146 | Canola | nucleus | 23.52 | 28.48 |
| CDX99147 | Canola | nucleus | 17.59 | 26.84 |
| CDX84438 | Canola | cytosol | 17.78 | 26.09 |
| CDY00148 | Canola | nucleus | 23.33 | 26.03 |
| CDY20037 | Canola | nucleus | 24.44 | 25.19 |
| CDY49768 | Canola | nucleus | 22.04 | 24.79 |
| CDY49559 | Canola | nucleus | 26.48 | 24.57 |
| CDY44786 | Canola | nucleus | 21.48 | 24.07 |
| CDY03991 | Canola | nucleus | 21.48 | 23.97 |
| CDY41533 | Canola | nucleus | 23.52 | 23.92 |
| CDX71262 | Canola | nucleus | 25.56 | 23.75 |
| CDY40734 | Canola | nucleus | 20.74 | 23.48 |
| CDX75425 | Canola | nucleus | 25.56 | 23.35 |
| CDX69049 | Canola | nucleus | 25.56 | 23.12 |
| CDY31353 | Canola | nucleus | 17.78 | 21.57 |
| CDY39850 | Canola | nucleus | 17.59 | 21.3 |
| CDY41534 | Canola | nucleus | 7.04 | 20.54 |
| CDX84439 | Canola | nucleus | 23.15 | 19.05 |
| CDY21562 | Canola | nucleus | 21.85 | 17.77 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 22.04 | 17.73 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078JAX4 | UniProt:A0A078JAX4 | EnsemblPlants:CDY61443 |
| ProteinID:CDY61443 | ProteinID:CDY61443.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00033858001 | InterPro:IBR_dom | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 |
| SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE3042 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | SEG:seg | : | : | : | : |
Description
BnaA02g34990DBnaA02g34990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAX4]
Coordinates
chrLK033996:+:24816..26477
Molecular Weight (calculated)
62023.0 Da
IEP (calculated)
6.110
GRAVY (calculated)
-0.669
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSDNDMLDA YDEESGEYDL YSDVDDEHDP HGGEDDSDYI LEEVVDDSIT HGSQINYVVL KEEDIRKRQE DDIKQLSTVL SITNAEASVL LLHYSWNVSK
101: LTDEWFADEE KVRRTVGVLE GRGGGSVVVG NHRKVKCGIC FDKFRRKKIV PVVCGHTFCS TCWNGYITTA INDGSGCLMQ KCPEPSCHIA IGRDLVEKVV
201: SEEDLRKYDR YFLRSYIEES KKMKWCPAPG CEGAVDFSAS GTGINYDVLC SCSHRFCWKC NEDAHSPVDC DMNTTWILAN SKACPKCKRP IEKNHGCMHM
301: TCGQPCKHQF CWLCLGAWKD HGGRTGGFYA CNKYEKDKKE GLYDDSEKKR QMAKSSLERY THYYERWASN EKSRGKAFGD LQVFLTEKIA KLSVIQCIPE
401: TQLTFITDAW LQIIECRRVL KWTYAYGYYL PESEREKRCF FEYVQGEAES GLERLHKCVE TEAEVFQDAG ERSELGFTAF REKLSNLTSV TKRHFETLVK
501: ALENGLSDVE SQAACTKETE SFKREIKSKE TKSKKRRRER
101: LTDEWFADEE KVRRTVGVLE GRGGGSVVVG NHRKVKCGIC FDKFRRKKIV PVVCGHTFCS TCWNGYITTA INDGSGCLMQ KCPEPSCHIA IGRDLVEKVV
201: SEEDLRKYDR YFLRSYIEES KKMKWCPAPG CEGAVDFSAS GTGINYDVLC SCSHRFCWKC NEDAHSPVDC DMNTTWILAN SKACPKCKRP IEKNHGCMHM
301: TCGQPCKHQF CWLCLGAWKD HGGRTGGFYA CNKYEKDKKE GLYDDSEKKR QMAKSSLERY THYYERWASN EKSRGKAFGD LQVFLTEKIA KLSVIQCIPE
401: TQLTFITDAW LQIIECRRVL KWTYAYGYYL PESEREKRCF FEYVQGEAES GLERLHKCVE TEAEVFQDAG ERSELGFTAF REKLSNLTSV TKRHFETLVK
501: ALENGLSDVE SQAACTKETE SFKREIKSKE TKSKKRRRER
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.