Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022845.1-P | Field mustard | nucleus | 99.46 | 99.64 |
| CDY23938 | Canola | nucleus | 98.01 | 97.49 |
| CDY15392 | Canola | nucleus | 96.03 | 95.51 |
| CDY19083 | Canola | nucleus | 95.13 | 94.95 |
| AT2G31510.1 | Thale cress | nucleus | 92.96 | 91.64 |
| CDY34490 | Canola | cytosol | 17.51 | 78.86 |
| CDY47704 | Canola | nucleus | 78.34 | 77.78 |
| CDY10162 | Canola | nucleus | 77.62 | 77.48 |
| CDX86547 | Canola | nucleus | 77.44 | 77.44 |
| CDY63791 | Canola | nucleus | 77.26 | 77.4 |
| Solyc06g073340.2.1 | Tomato | nucleus | 72.02 | 72.55 |
| PGSC0003DMT400069483 | Potato | nucleus | 72.38 | 72.25 |
| KRH23186 | Soybean | nucleus | 75.09 | 70.63 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 74.73 | 70.53 |
| KRH10154 | Soybean | nucleus | 74.91 | 70.46 |
| Os04t0492100-01 | Rice | nucleus | 58.66 | 68.86 |
| KRH29654 | Soybean | nucleus | 71.66 | 67.75 |
| KRH24651 | Soybean | nucleus | 71.48 | 67.58 |
| EES11042 | Sorghum | nucleus | 71.84 | 67.57 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 71.48 | 67.46 |
| Zm00001d003207_P001 | Maize | nucleus | 71.66 | 67.4 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 68.05 | 67.32 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 66.97 | 67.21 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 71.12 | 67.12 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 71.3 | 67.06 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 71.3 | 67.06 |
| Zm00001d025750_P011 | Maize | extracellular | 71.3 | 67.06 |
| CDY16406 | Canola | nucleus | 66.06 | 66.91 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 71.12 | 66.89 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 70.94 | 66.72 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 70.94 | 66.72 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 70.76 | 66.55 |
| CDY57807 | Canola | nucleus | 67.51 | 66.31 |
| CDX79440 | Canola | cytosol | 20.4 | 66.08 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 69.68 | 65.76 |
| CDY68344 | Canola | nucleus | 57.76 | 64.26 |
| CDX70415 | Canola | nucleus | 60.83 | 64.19 |
| CDX78438 | Canola | nucleus | 55.6 | 62.22 |
| CDX91196 | Canola | nucleus | 56.68 | 61.69 |
| CDY68345 | Canola | cytosol | 48.56 | 61.28 |
| CDY61443 | Canola | nucleus | 58.48 | 60.0 |
| CDX84759 | Canola | nucleus | 55.96 | 59.5 |
| CDY15373 | Canola | nucleus | 57.94 | 58.68 |
| CDY42068 | Canola | nucleus | 47.83 | 57.99 |
| CDX79439 | Canola | nucleus | 33.75 | 57.19 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 66.25 | 54.86 |
| CDY15374 | Canola | nucleus | 56.32 | 54.45 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 28.34 | 53.4 |
| Zm00001d046141_P001 | Maize | cytosol | 25.63 | 50.0 |
| CDY47702 | Canola | cytosol | 36.1 | 38.39 |
| CDY10159 | Canola | cytosol | 36.1 | 37.88 |
| CDX99146 | Canola | nucleus | 24.55 | 30.49 |
| CDX99147 | Canola | nucleus | 18.23 | 28.53 |
| CDX84438 | Canola | cytosol | 18.41 | 27.72 |
| CDY00148 | Canola | nucleus | 23.83 | 27.27 |
| CDY40734 | Canola | nucleus | 22.92 | 26.62 |
| CDY20037 | Canola | nucleus | 25.09 | 26.53 |
| CDY49559 | Canola | nucleus | 27.44 | 26.12 |
| CDX75425 | Canola | nucleus | 27.8 | 26.06 |
| CDY44786 | Canola | nucleus | 22.56 | 25.93 |
| CDY49768 | Canola | nucleus | 22.38 | 25.83 |
| CDY03991 | Canola | nucleus | 22.56 | 25.83 |
| CDX69049 | Canola | nucleus | 27.62 | 25.63 |
| CDX71262 | Canola | nucleus | 26.71 | 25.47 |
| CDY41533 | Canola | nucleus | 22.74 | 23.73 |
| CDY31353 | Canola | nucleus | 18.59 | 23.15 |
| CDY39850 | Canola | nucleus | 18.59 | 23.09 |
| CDY41534 | Canola | nucleus | 7.04 | 21.08 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 24.01 | 19.82 |
| CDX84439 | Canola | nucleus | 23.29 | 19.66 |
| CDY21562 | Canola | nucleus | 23.47 | 19.58 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078D611 | EnsemblPlants:CDX84781 | ProteinID:CDX84781 |
| ProteinID:CDX84781.1 | ncoils:Coil | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00142074001 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 |
| PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 |
| UniParc:UPI0004EF122F | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
BnaA03g14490D
Coordinates
chrLK031838:+:1207520..1212130
Molecular Weight (calculated)
63400.5 Da
IEP (calculated)
4.612
GRAVY (calculated)
-0.704
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEDDMLDM YSGEDDFYSD DYKDSDNDDD DDDDDGEPDY GFVEEDADDS AMIASHRSQK NYCVLREEDI LRHQVDDIER VSVVLSITEV EASILLRHYH
101: WSVGKVHDEW FADEERVRNT VGILENPVVP PSDDTELTCG ICFDSYPPEK IVSVSCGHPF CTTCWTGYIT TTINDGPGCL MLRCPDPSCL AAVGHDMVDK
201: LASDEDKEKY NRYFLRSYIE DNRKMKWCPA PGCDYAIDYV AGSGNYDVSC LCSFSFCWNC TEEAHRPVDC STVSKWILKN SAESENMNWI LANSKPCPRC
301: KRPIEKNQGC MHMTCTPPCK YEFCWLCLGA WMDHGERTGG FYACNRYEVA KQEGQYDETE RRREMAKNSL ERYTHYYERW ASNQTSRQKA MTDLQQLQTH
401: NLEKLSDKQC TPESQLKFIL EAWLQIIECR RVLKWTYAYG YYLPDHEHAK RVFFEYLQGE AESGLERLHQ CVEKDLLQFL NAEGPSKDFN DFRTKLAGLT
501: SVTKNYFENL VKALENGLAD VDSHAACSSK STSSKSTGCS SKTRGKGKGS SRTG
101: WSVGKVHDEW FADEERVRNT VGILENPVVP PSDDTELTCG ICFDSYPPEK IVSVSCGHPF CTTCWTGYIT TTINDGPGCL MLRCPDPSCL AAVGHDMVDK
201: LASDEDKEKY NRYFLRSYIE DNRKMKWCPA PGCDYAIDYV AGSGNYDVSC LCSFSFCWNC TEEAHRPVDC STVSKWILKN SAESENMNWI LANSKPCPRC
301: KRPIEKNQGC MHMTCTPPCK YEFCWLCLGA WMDHGERTGG FYACNRYEVA KQEGQYDETE RRREMAKNSL ERYTHYYERW ASNQTSRQKA MTDLQQLQTH
401: NLEKLSDKQC TPESQLKFIL EAWLQIIECR RVLKWTYAYG YYLPDHEHAK RVFFEYLQGE AESGLERLHQ CVEKDLLQFL NAEGPSKDFN DFRTKLAGLT
501: SVTKNYFENL VKALENGLAD VDSHAACSSK STSSKSTGCS SKTRGKGKGS SRTG
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.