Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20037 | Canola | nucleus | 94.01 | 86.83 |
| CDY49768 | Canola | nucleus | 66.53 | 67.08 |
| CDY03991 | Canola | nucleus | 66.74 | 66.74 |
| AT3G27710.1 | Thale cress | nucleus | 61.98 | 55.87 |
| AT3G27720.1 | Thale cress | nucleus | 54.96 | 53.96 |
| CDX75425 | Canola | nucleus | 59.3 | 48.56 |
| CDX69049 | Canola | nucleus | 59.5 | 48.24 |
| CDY49559 | Canola | nucleus | 57.85 | 48.11 |
| VIT_18s0001g11740.t01 | Wine grape | cytosol | 54.75 | 47.75 |
| CDX71262 | Canola | nucleus | 57.23 | 47.68 |
| PGSC0003DMT400043486 | Potato | cytosol | 49.17 | 45.68 |
| Solyc04g079780.2.1 | Tomato | cytosol | 49.17 | 45.59 |
| KRH24517 | Soybean | nucleus | 54.55 | 45.52 |
| KRH29521 | Soybean | nucleus | 54.34 | 45.34 |
| PGSC0003DMT400064832 | Potato | nucleus | 54.75 | 44.92 |
| Solyc12g089000.1.1 | Tomato | nucleus | 49.79 | 44.88 |
| VIT_03s0063g02000.t01 | Wine grape | nucleus | 54.55 | 44.82 |
| Solyc01g109280.2.1 | Tomato | nucleus | 54.55 | 44.75 |
| PGSC0003DMT400039948 | Potato | nucleus | 49.79 | 44.38 |
| GSMUA_Achr5P01850_001 | Banana | nucleus | 46.49 | 41.74 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 51.45 | 40.16 |
| EER92613 | Sorghum | nucleus | 50.0 | 40.07 |
| Os03t0233500-01 | Rice | nucleus | 50.41 | 39.87 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 51.03 | 39.84 |
| TraesCS4B01G236900.1 | Wheat | nucleus | 51.03 | 39.84 |
| HORVU4Hr1G066180.1 | Barley | nucleus | 50.83 | 39.68 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 52.07 | 39.19 |
| Zm00001d028285_P003 | Maize | nucleus | 49.79 | 38.87 |
| HORVU1Hr1G018020.1 | Barley | cytosol | 14.05 | 36.96 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 40.5 | 36.7 |
| TraesCS4B01G071700.1 | Wheat | nucleus | 40.7 | 36.41 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 39.67 | 35.04 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 38.84 | 34.94 |
| TraesCS4B01G071800.1 | Wheat | nucleus | 39.26 | 34.61 |
| EER93787 | Sorghum | nucleus | 38.22 | 34.58 |
| EER93790 | Sorghum | nucleus | 38.64 | 34.5 |
| Zm00001d013716_P002 | Maize | nucleus | 37.81 | 34.27 |
| Os03t0625800-01 | Rice | cytosol | 37.6 | 33.7 |
| HORVU4Hr1G011770.1 | Barley | nucleus | 36.98 | 33.33 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 36.78 | 33.33 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 36.36 | 32.84 |
| TraesCS4B01G070800.1 | Wheat | nucleus | 35.54 | 32.09 |
| HORVU7Hr1G068450.2 | Barley | nucleus | 16.94 | 32.03 |
| Zm00001d048017_P003 | Maize | nucleus | 49.59 | 31.37 |
| HORVU4Hr1G011910.1 | Barley | cytosol, plastid | 39.05 | 30.88 |
| Os03t0625933-00 | Rice | nucleus | 20.45 | 30.09 |
| Os03t0626100-01 | Rice | nucleus | 35.12 | 29.82 |
| CDX79439 | Canola | nucleus | 17.36 | 25.69 |
| CDY68344 | Canola | nucleus | 26.24 | 25.5 |
| CDX78438 | Canola | nucleus | 26.03 | 25.45 |
| CDY68345 | Canola | cytosol | 22.73 | 25.06 |
| CDX91196 | Canola | nucleus | 26.24 | 24.95 |
| CDY63791 | Canola | nucleus | 28.31 | 24.77 |
| CDX86547 | Canola | nucleus | 28.1 | 24.55 |
| CDX84759 | Canola | nucleus | 26.24 | 24.38 |
| CDY47704 | Canola | nucleus | 27.69 | 24.01 |
| CDX70415 | Canola | nucleus | 26.03 | 24.0 |
| CDY10162 | Canola | nucleus | 27.48 | 23.96 |
| CDX84781 | Canola | nucleus | 27.27 | 23.83 |
| CDY23938 | Canola | nucleus | 27.27 | 23.7 |
| CDY61443 | Canola | nucleus | 26.03 | 23.33 |
| CDX99147 | Canola | nucleus | 16.94 | 23.16 |
| CDY19083 | Canola | nucleus | 26.24 | 22.88 |
| CDY15392 | Canola | nucleus | 26.24 | 22.8 |
| CDY16406 | Canola | nucleus | 25.21 | 22.3 |
| CDY15373 | Canola | nucleus | 25.21 | 22.3 |
| CDY57807 | Canola | nucleus | 25.21 | 21.63 |
| CDY15374 | Canola | nucleus | 24.79 | 20.94 |
| CDY42068 | Canola | nucleus | 19.63 | 20.79 |
| CDX99146 | Canola | nucleus | 19.01 | 20.63 |
| CDY47702 | Canola | cytosol | 19.42 | 18.04 |
| CDX84438 | Canola | cytosol | 13.64 | 17.93 |
| CDY10159 | Canola | cytosol | 18.8 | 17.23 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 10.33 | 17.01 |
| CDY41533 | Canola | nucleus | 18.18 | 16.57 |
| CDX79440 | Canola | cytosol | 5.79 | 16.37 |
| CDY40734 | Canola | nucleus | 16.12 | 16.35 |
| CDY44786 | Canola | nucleus | 15.7 | 15.77 |
| CDY39850 | Canola | nucleus | 14.46 | 15.7 |
| CDY31353 | Canola | nucleus | 14.26 | 15.51 |
| CDY21562 | Canola | nucleus | 19.21 | 14.01 |
| CDX84439 | Canola | nucleus | 18.18 | 13.41 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 17.98 | 12.97 |
| CDY34490 | Canola | cytosol | 3.1 | 12.2 |
| CDY41534 | Canola | nucleus | 3.72 | 9.73 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078ELB1 | EnsemblPlants:CDY00148 | ProteinID:CDY00148 |
| ProteinID:CDY00148.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00109661001 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS00518 |
| PANTHER:PTHR11685 | PANTHER:PTHR11685:SF150 | SMART:SM00184 | SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 |
| UniParc:UPI0004EEEF85 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : |
Description
BnaC09g01530D
Coordinates
chrLK031916:-:1055232..1056824
Molecular Weight (calculated)
56710.8 Da
IEP (calculated)
5.418
GRAVY (calculated)
-0.737
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDYYLSCE EDEEEKEEEG DDYDKDDNDQ YEQAHPAQKE VLVRVMELLT LKKSQARTLL IHYRWNVDKL LDVYSERGKE SLFKTAGLTV FAHTSLSESR
101: YSLRKKMTCE ICMDDDLQSY TMTRMDCGHC FCNNCWKEHF TKLVYPELAE KFDRFLVESY VDDNKRVKWC PSTPHCGNAI RREDDGGEVE CSCGHQFCFS
201: CVSESHSPCS CLMWKLWKKK CEDESETLNW ITVHTRMCPK CSKAVQKSDG CNLMTCICGQ HFCWLCGGAT GLSHTWTTID GHSCGKFKEE KVRQMERAKR
301: DLKRYTHYYH QYRSHTDSSK QEFKLRESVR EKVASLSEKT HKSEQKWASN GADLLFRSRK ALSYTYVFAF YMFGEELFKD EMSDEEREMK KILFENLQQQ
401: LIGYIERLSK TLNQPFDYYS SDELEKMNDE TMRFGIVVDN LCKEMYECIE NELLGPTVAG HNHSIAPYRS EGIEKAIEFG ADMV
101: YSLRKKMTCE ICMDDDLQSY TMTRMDCGHC FCNNCWKEHF TKLVYPELAE KFDRFLVESY VDDNKRVKWC PSTPHCGNAI RREDDGGEVE CSCGHQFCFS
201: CVSESHSPCS CLMWKLWKKK CEDESETLNW ITVHTRMCPK CSKAVQKSDG CNLMTCICGQ HFCWLCGGAT GLSHTWTTID GHSCGKFKEE KVRQMERAKR
301: DLKRYTHYYH QYRSHTDSSK QEFKLRESVR EKVASLSEKT HKSEQKWASN GADLLFRSRK ALSYTYVFAF YMFGEELFKD EMSDEEREMK KILFENLQQQ
401: LIGYIERLSK TLNQPFDYYS SDELEKMNDE TMRFGIVVDN LCKEMYECIE NELLGPTVAG HNHSIAPYRS EGIEKAIEFG ADMV
001: MDDNLSGEEE DYYYSSDQES LNGIDNDESV SIPVSSRSNT VKVITKESLL AAQREDLRRV MELLSVKEHH ARTLLIHYRW DVEKLFAVLV EKGKDSLFSG
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
Arabidopsis Description
ARI2Probable E3 ubiquitin-protein ligase ARI2 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.