Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49768 | Canola | nucleus | 91.06 | 99.79 |
| Bra039068.1-P | Field mustard | nucleus | 71.48 | 71.76 |
| AT3G27710.1 | Thale cress | nucleus | 63.69 | 62.38 |
| AT3G27720.1 | Thale cress | nucleus | 51.71 | 55.17 |
| Bra011524.1-P | Field mustard | nucleus | 61.22 | 54.48 |
| Bra001960.1-P | Field mustard | nucleus | 59.51 | 53.78 |
| KRH24517 | Soybean | nucleus | 56.84 | 51.55 |
| KRH29521 | Soybean | nucleus | 56.65 | 51.38 |
| PGSC0003DMT400043486 | Potato | cytosol | 50.76 | 51.25 |
| Solyc04g079780.2.1 | Tomato | cytosol | 50.76 | 51.15 |
| VIT_03s0063g02000.t01 | Wine grape | nucleus | 56.08 | 50.08 |
| Solyc01g109280.2.1 | Tomato | nucleus | 56.08 | 50.0 |
| PGSC0003DMT400064832 | Potato | nucleus | 55.7 | 49.66 |
| VIT_18s0001g11740.t01 | Wine grape | cytosol | 52.09 | 49.37 |
| Solyc12g089000.1.1 | Tomato | nucleus | 49.43 | 48.42 |
| PGSC0003DMT400039948 | Potato | nucleus | 49.43 | 47.88 |
| EER92613 | Sorghum | nucleus | 50.57 | 44.04 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 51.9 | 44.03 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 51.9 | 44.03 |
| TraesCS4B01G236900.1 | Wheat | nucleus | 51.52 | 43.71 |
| Os03t0233500-01 | Rice | nucleus | 50.76 | 43.63 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 53.04 | 43.39 |
| HORVU4Hr1G066180.1 | Barley | nucleus | 51.14 | 43.39 |
| GSMUA_Achr5P01850_001 | Banana | nucleus | 43.73 | 42.67 |
| Zm00001d028285_P003 | Maize | nucleus | 50.0 | 42.42 |
| TraesCS4B01G071700.1 | Wheat | nucleus | 39.16 | 38.08 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 39.54 | 37.96 |
| HORVU1Hr1G018020.1 | Barley | cytosol | 13.12 | 37.5 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 38.02 | 37.45 |
| TraesCS4B01G071800.1 | Wheat | nucleus | 38.97 | 37.34 |
| Os03t0625800-01 | Rice | cytosol | 38.21 | 37.22 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 38.02 | 37.17 |
| Zm00001d013716_P002 | Maize | nucleus | 37.26 | 36.7 |
| EER93790 | Sorghum | nucleus | 37.26 | 36.16 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 36.69 | 36.14 |
| HORVU4Hr1G011770.1 | Barley | nucleus | 36.88 | 36.13 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 36.31 | 35.63 |
| Os03t0625933-00 | Rice | nucleus | 22.05 | 35.26 |
| EER93787 | Sorghum | nucleus | 35.74 | 35.14 |
| Zm00001d048017_P003 | Maize | nucleus | 50.76 | 34.9 |
| TraesCS4B01G070800.1 | Wheat | nucleus | 35.55 | 34.89 |
| HORVU4Hr1G011910.1 | Barley | cytosol, plastid | 38.78 | 33.33 |
| HORVU7Hr1G068450.2 | Barley | nucleus | 15.59 | 32.03 |
| Os03t0626100-01 | Rice | nucleus | 34.03 | 31.4 |
| Bra021742.1-P | Field mustard | nucleus | 23.38 | 24.7 |
| Bra006112.1-P | Field mustard | nucleus | 24.52 | 24.16 |
| Bra021726.1-P | Field mustard | nucleus | 22.62 | 23.71 |
| Bra022845.1-P | Field mustard | nucleus | 24.9 | 23.69 |
| Bra005642.1-P | Field mustard | nucleus | 22.81 | 23.53 |
| Bra015463.1-P | Field mustard | nucleus | 24.9 | 23.48 |
| Bra022865.1-P | Field mustard | nucleus | 23.19 | 23.42 |
| Bra023338.1-P | Field mustard | nucleus | 24.52 | 23.37 |
| Bra022479.1-P | Field mustard | nucleus | 23.95 | 22.34 |
| Bra015460.1-P | Field mustard | nucleus | 19.39 | 19.62 |
| Bra018221.1-P | Field mustard | cytosol | 16.35 | 19.15 |
| Bra038659.1-P | Field mustard | nucleus | 16.92 | 17.76 |
| Bra028646.1-P | Field mustard | nucleus | 15.4 | 17.05 |
| Bra038658.1-P | Field mustard | nucleus | 13.69 | 16.67 |
| Bra029204.1-P | Field mustard | nucleus | 12.55 | 14.83 |
| Bra038276.1-P | Field mustard | cytosol | 16.35 | 14.26 |
| Bra009365.1-P | Field mustard | cytosol | 17.3 | 13.6 |
| Bra038660.1-P | Field mustard | cytosol | 3.23 | 9.19 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | EnsemblPlantsGene:Bra033024 | EnsemblPlants:Bra033024.1 | EnsemblPlants:Bra033024.1-P |
| InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0046872 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | UniProt:M4EW41 | PFAM:PF01485 |
| PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF150 | SMART:SM00647 | SUPFAM:SSF57850 | UniParc:UPI000254720C |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
AT3G27710 (E=2e-202) ATARI13, ARI13 | zinc finger protein-related
Coordinates
chrA02:-:21851616..21853196
Molecular Weight (calculated)
60544.4 Da
IEP (calculated)
5.116
GRAVY (calculated)
-0.588
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDYMSYEE EEEEEDYDSF DQYQEDYYEE PELQRVSSKN STCQIITMES LVAAQKEVLV RVMESLSVKE SQARTLLIHY QWNVDNLFAV YIERGKESLF
101: KSAGLSVFDH PSLSKSRKKM ACDICMEDDL PSHAMTGMEC GHSFCNDCWK EHFTIKINEG QSKRIACMAH KCNAICDADA VRTLVCPELA EKFDRFLVES
201: YVDDNKLVKW CPSTPHCGNA IRKVDDDGGE VECSCGHQFC FTCLGESHSP CSCLMWKLWT KKCEDESESV TWLTIHTRMC PKCSKPVHKT VGCNLVTCIC
301: GQYFCWLCGG ATGRDHTWTS ISGHDCGRYK EDKVRQTERA NRDSDRYAHY LHQYKSHTDS SKQEDELRKI VREKAALVTS KTKDSTFKTM DWAINGADLL
401: FRSRKILSKS YPFAFYMFGE ELFKDKMSDE DREIKKNLFE NQQQQLTGNI ETLSKILNVS FDEYSSDELK KMRGETRDIG LVVDKVCKLM YECIENDLLG
501: TAQDGINHSI SPYRSEGIEK AVEFLC
101: KSAGLSVFDH PSLSKSRKKM ACDICMEDDL PSHAMTGMEC GHSFCNDCWK EHFTIKINEG QSKRIACMAH KCNAICDADA VRTLVCPELA EKFDRFLVES
201: YVDDNKLVKW CPSTPHCGNA IRKVDDDGGE VECSCGHQFC FTCLGESHSP CSCLMWKLWT KKCEDESESV TWLTIHTRMC PKCSKPVHKT VGCNLVTCIC
301: GQYFCWLCGG ATGRDHTWTS ISGHDCGRYK EDKVRQTERA NRDSDRYAHY LHQYKSHTDS SKQEDELRKI VREKAALVTS KTKDSTFKTM DWAINGADLL
401: FRSRKILSKS YPFAFYMFGE ELFKDKMSDE DREIKKNLFE NQQQQLTGNI ETLSKILNVS FDEYSSDELK KMRGETRDIG LVVDKVCKLM YECIENDLLG
501: TAQDGINHSI SPYRSEGIEK AVEFLC
001: MDDDYMMLDD DYGEEEDENY SEDDNYSEAE VDLQPVTSTK STSQVIKKES LVAAQKEILV RVMELLSVKE NQARTLLIYY QWNVEKLFSV FADQGKDRMF
101: SCAGLTVFVP SLVTSKKTMK CDVCMEDDLP SNVMTRMECG HRFCNDCWIG HFTVKINEGE SKRILCMAHE CKAICDEDVV RKLVSPELAD RYDRFLIESY
201: VEDNNMVKWC PSKPHCGSAI RKIEDGHDVV EVGCSCGLQF CFSCLSESHS PCSCLMWKLW KKKCEDESET VNWITVNTKL CPKCSKPIQK RDGCNLMTCK
301: CGQHFCWLCG QATGRDHTYT SIAGHSCGRY KDEKVRQLER AQRDLDRYTH YHYRYKAHID SLKLEDKLRK SILEKAVSNS ETKDQKVFKE YSWVTDAVNR
401: LFISRRILSQ SYPFAFYMFG EELFKDEMSE KEREIKKNLF EDQQQQLEGN VEKLSKILEE PFDEYDHEKV VEMMRHLTNL TAVVDNLCKE MYECIENELL
501: GPIQFGNHNI APYRSKGIEQ ATEFCAESSD CGSSGSS
101: SCAGLTVFVP SLVTSKKTMK CDVCMEDDLP SNVMTRMECG HRFCNDCWIG HFTVKINEGE SKRILCMAHE CKAICDEDVV RKLVSPELAD RYDRFLIESY
201: VEDNNMVKWC PSKPHCGSAI RKIEDGHDVV EVGCSCGLQF CFSCLSESHS PCSCLMWKLW KKKCEDESET VNWITVNTKL CPKCSKPIQK RDGCNLMTCK
301: CGQHFCWLCG QATGRDHTYT SIAGHSCGRY KDEKVRQLER AQRDLDRYTH YHYRYKAHID SLKLEDKLRK SILEKAVSNS ETKDQKVFKE YSWVTDAVNR
401: LFISRRILSQ SYPFAFYMFG EELFKDEMSE KEREIKKNLF EDQQQQLEGN VEKLSKILEE PFDEYDHEKV VEMMRHLTNL TAVVDNLCKE MYECIENELL
501: GPIQFGNHNI APYRSKGIEQ ATEFCAESSD CGSSGSS
Arabidopsis Description
ARI3Probable E3 ubiquitin-protein ligase ARI3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVX0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.