Factsheet for Bra038660.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41534	Canola	nucleus	99.46	99.46
Bra038659.1-P	Field mustard	nucleus	62.7	23.15
Bra029204.1-P	Field mustard	nucleus	51.89	21.57
Bra038658.1-P	Field mustard	nucleus	50.27	21.53
AT5G63760.2	Thale cress	nucleus	45.41	18.58
AT5G63750.1	Thale cress	nucleus	51.35	17.72
AT5G63730.1	Thale cress	cytosol	48.11	17.59
Bra028646.1-P	Field mustard	nucleus	30.27	11.79
Bra022479.1-P	Field mustard	nucleus	28.11	9.22
Bra018221.1-P	Field mustard	cytosol	22.16	9.13
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	21.62	7.81
Bra009365.1-P	Field mustard	cytosol	28.11	7.77
Bra021726.1-P	Field mustard	nucleus	21.08	7.77
Bra021742.1-P	Field mustard	nucleus	20.0	7.43
Bra015460.1-P	Field mustard	nucleus	20.0	7.12
Bra022865.1-P	Field mustard	nucleus	20.0	7.1
Bra022845.1-P	Field mustard	nucleus	21.08	7.05
Bra015463.1-P	Field mustard	nucleus	21.08	6.99
Bra038276.1-P	Field mustard	cytosol	22.7	6.97
Bra023338.1-P	Field mustard	nucleus	20.54	6.88
Bra005642.1-P	Field mustard	nucleus	17.3	6.27
Bra006112.1-P	Field mustard	nucleus	17.84	6.18
KRH24184	Soybean	nucleus	17.3	6.13
Bra001960.1-P	Field mustard	nucleus	12.43	3.95
Bra039068.1-P	Field mustard	nucleus	10.27	3.63
Bra011524.1-P	Field mustard	nucleus	11.35	3.55
Bra033024.1-P	Field mustard	nucleus	9.19	3.23

Protein Annotations

EnsemblPlants:Bra038660.1	EnsemblPlants:Bra038660.1-P	EnsemblPlantsGene:Bra038660	Gene3D:1.20.120.1750	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	InterPro:E3_UB_ligase_RBR	ncoils:Coil	PANTHER:PTHR11685	PANTHER:PTHR11685:SF213
UniParc:UPI000253F2C8	UniProt:M4FC44	MapMan:35.1	:	:	:

Description

AT5G63750 (E=1e-040) | IBR domain-containing protein

Coordinates

chrA06:-:14445107..14445664

Molecular Weight (calculated)

21717.5 Da

IEP (calculated)

4.449

GRAVY (calculated)

-0.471

Length

185 amino acids

Sequence
(BLAST)

001: MDDTSCLDRW EACEASMEKA RSELQAFEES NNTTLREGLM MIVQCRQFLK WSCVYEYIHL EHEDSKEEFL RFLQDYASTL VQSFSETLKK EREKALSETT
101: LEEVTCSRGN LYDVTINIGN YLYNFGKALQ DGLDVVEVRH YDDFSPCWLC DRCTYAYTWL HKVCQMCYEF PVEKPSGSFL NKVSS

Best Arabidopsis Sequence Match ( AT5G63730.1 )
(BLAST)

001: MEYDGRRPYS VLTRNEITVK MKKQINEISD IFFISNSDAT VLLMYLRWDS LRVSERLGEN KEKLLMDSGL KSVMIDPSPD SSSEISLETD VYEFDGDNDL
101: ISMPFCSHKF DSKYWREYLE KNFYYVEKIQ TTISCPDQDC RSAVGPDTIE KLTVRDQEMY ERYIWRSYIE GNKVLMIKQC PARNCDYVIE FHQENDDDDE
201: YSLNVVCICG HIFCWRCRLE SHRPVSCNKA SDWLCSATMK ISDESFSLYP TKTKTVTCPH CLCSLESDTK MPQFLTCVCR LRFCSRCLRS EEAHKIEAVD
301: SGFCIKTEVG ILCEDRWNVC QKLLEQAKSD LEAFEETNIK KPSDLLREQD IMIIREGLML IVQCRRVLKW CCVYDYFHTE YENSKEYLRY LQGNAIATLQ
401: SYSNTLQEQK DIVLAAATYE ECTFFRHTIP TATSNIGNYF YDFMKTLQDG LVDVKVKSYN GGTGPFWYCD RCTYANTWED NECEMCYDDS ASLVGEISDL
501: FLNKVS

Arabidopsis Description

ARI14Probable E3 ubiquitin-protein ligase ARI14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFP1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.