Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES08947 | Sorghum | nucleus | 71.04 | 67.37 |
| Zm00001d048683_P001 | Maize | nucleus | 36.15 | 63.59 |
| Os09t0559000-00 | Rice | cytosol | 28.57 | 56.0 |
| TraesCS6D01G402400.1 | Wheat | nucleus | 29.93 | 54.61 |
| TraesCS6A01G417200.1 | Wheat | nucleus | 29.74 | 53.87 |
| TraesCS6B01G472300.1 | Wheat | nucleus | 29.35 | 53.26 |
| HORVU3Hr1G019640.1 | Barley | cytosol, peroxisome, plastid | 10.88 | 52.58 |
| HORVU3Hr1G049680.1 | Barley | nucleus | 17.01 | 48.21 |
| HORVU5Hr1G089940.1 | Barley | cytosol | 15.35 | 47.45 |
| HORVU5Hr1G089020.2 | Barley | nucleus | 25.95 | 44.06 |
| Os09t0559100-00 | Rice | nucleus | 7.48 | 39.09 |
| Zm00001d003207_P001 | Maize | nucleus | 22.35 | 39.05 |
| Zm00001d025750_P011 | Maize | extracellular | 22.25 | 38.88 |
| Zm00001d052709_P002 | Maize | plastid | 17.69 | 37.07 |
| Zm00001d031694_P003 | Maize | nucleus | 21.96 | 34.56 |
| Zm00001d046141_P001 | Maize | cytosol | 8.75 | 31.69 |
| Zm00001d013716_P002 | Maize | nucleus | 12.34 | 23.78 |
| Zm00001d028285_P003 | Maize | nucleus | 13.12 | 21.77 |
| Zm00001d048017_P003 | Maize | nucleus | 13.51 | 18.17 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:15.3.3.5.1 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | UniProt:A0A1D6F853 | ncoils:Coil |
| InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0016874 |
| GO:GO:0019538 | GO:GO:0046872 | InterPro:IBR_dom | InterPro:IPR013083 | ProteinID:ONM27388.1 | PFAM:PF01485 |
| ScanProsite:PS00518 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF216 | SMART:SM00647 | SUPFAM:SSF57850 | UniParc:UPI000843250D |
| EnsemblPlantsGene:Zm00001d007709 | EnsemblPlants:Zm00001d007709_P003 | EnsemblPlants:Zm00001d007709_T003 | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
Probable E3 ubiquitin-protein ligase ARI16
Coordinates
chr2:-:237903357..237908436
Molecular Weight (calculated)
114452.0 Da
IEP (calculated)
6.454
GRAVY (calculated)
-0.613
Length
1029 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASCGGGVCL KRDRREEEEN DDDKGETSGR NKRPSSGAYY TGAGVDAQRT DDDDSAAADY MYEYDDGYEE EESAAEQPKG DDASARDTEQ RYAVLTEDDV
0101: RARQEADTAR VAEVLSIPAG FARALLRHFK WRVGRAQEEW FSDAQHQQRV RGAVGLVPAA CPDGDALVPA ARSPRPRVCG ICFDAFPAGG TRSAGCAAHY
0201: YCDGCWCGYV AAAVGDGARC LALRCPDPSC AAAVVRELVD EVARDDDRAR YARFWLRSYV EESGGRIRWC GGAGCTRSVE LLGGCDAEAV ASAVDVVCGC
0301: RHAFCWRCGE EAHRPVSCGT VRAWLAKNAS DSETANWVVA NTKRCPMCRR PIEKNHGCNH MTCGAPCHHQ FCWLCLDPWD HHRGCTRYDS RRRRRHGPVD
0401: EVEDEEEQAQ RTLAKASLDR YLYHYERWEG NGKSLRKALA DADELERSEL QRMARLLDLP AMDLGFVTEA YRQIADGRRV LRWAHAYDYF LSLDPERDAA
0501: KRGLFDDLQS QANRWLECLH GCAELERKHL FGAADADAED EPTVAAAAFM AYKERLANLT GVTRRFIGNL VRAFKTNLPE VVVTLTPPAS DLQHIVKSGP
0601: TTERQTTVGI GGILSTEATV TLPVSNVSSL QGTSALRPSS SSLVVSQETD IANDSVQERH SPTRNLAQAQ HPVRPGGHGG FLSNPYPSFF GEATSTAGPL
0701: QLYMPNMVVS GGTTSTPSLA FSLSALGQPI TSTALGGSFG SNTRTAWGNS DMAAASSSQP DRMGMDQQAG TGSAMNLTIG LHPNAQQPPP KYVKIWEGDL
0801: YGQRQGQPVF ISKLESWGGT VSRKYSESQY VGNTDFLIFR ALNQHGFLGQ LQERKLCGVI QLPSQTLLLS MYDKTSRMVG MLFPKNMLMF RPEALTQPSP
0901: VQQEELIHHQ QQQLQQQQRN IHRLQRQLIQ KQQQQHMQKL LPQRLQYQEQ LHLQQQMTQQ IQQQQQSLYQ QHQQMQHQQQ LWQQIQQQKH QLQHMDPQQQ
1001: QLLSQMVGTE LGSDDDTRED WVTGAGPHA
0101: RARQEADTAR VAEVLSIPAG FARALLRHFK WRVGRAQEEW FSDAQHQQRV RGAVGLVPAA CPDGDALVPA ARSPRPRVCG ICFDAFPAGG TRSAGCAAHY
0201: YCDGCWCGYV AAAVGDGARC LALRCPDPSC AAAVVRELVD EVARDDDRAR YARFWLRSYV EESGGRIRWC GGAGCTRSVE LLGGCDAEAV ASAVDVVCGC
0301: RHAFCWRCGE EAHRPVSCGT VRAWLAKNAS DSETANWVVA NTKRCPMCRR PIEKNHGCNH MTCGAPCHHQ FCWLCLDPWD HHRGCTRYDS RRRRRHGPVD
0401: EVEDEEEQAQ RTLAKASLDR YLYHYERWEG NGKSLRKALA DADELERSEL QRMARLLDLP AMDLGFVTEA YRQIADGRRV LRWAHAYDYF LSLDPERDAA
0501: KRGLFDDLQS QANRWLECLH GCAELERKHL FGAADADAED EPTVAAAAFM AYKERLANLT GVTRRFIGNL VRAFKTNLPE VVVTLTPPAS DLQHIVKSGP
0601: TTERQTTVGI GGILSTEATV TLPVSNVSSL QGTSALRPSS SSLVVSQETD IANDSVQERH SPTRNLAQAQ HPVRPGGHGG FLSNPYPSFF GEATSTAGPL
0701: QLYMPNMVVS GGTTSTPSLA FSLSALGQPI TSTALGGSFG SNTRTAWGNS DMAAASSSQP DRMGMDQQAG TGSAMNLTIG LHPNAQQPPP KYVKIWEGDL
0801: YGQRQGQPVF ISKLESWGGT VSRKYSESQY VGNTDFLIFR ALNQHGFLGQ LQERKLCGVI QLPSQTLLLS MYDKTSRMVG MLFPKNMLMF RPEALTQPSP
0901: VQQEELIHHQ QQQLQQQQRN IHRLQRQLIQ KQQQQHMQKL LPQRLQYQEQ LHLQQQMTQQ IQQQQQSLYQ QHQQMQHQQQ LWQQIQQQKH QLQHMDPQQQ
1001: QLLSQMVGTE LGSDDDTRED WVTGAGPHA
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.