Factsheet for Os09t0559100-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G019640.1	Barley	cytosol, peroxisome, plastid	23.86	22.07
Zm00001d048683_P001	Maize	nucleus	45.69	15.38
Os09t0559000-00	Rice	cytosol	39.59	14.86
OQU83976	Sorghum	cytosol	36.04	13.32
TraesCS6D01G402400.1	Wheat	nucleus	37.56	13.12
EES08939	Sorghum	nucleus	43.15	12.94
TraesCS6B01G472300.1	Wheat	nucleus	37.06	12.87
TraesCS6A01G417200.1	Wheat	nucleus	37.06	12.85
EES08942	Sorghum	cytosol	35.53	12.64
OQU83975	Sorghum	nucleus	37.56	12.4
HORVU5Hr1G089020.2	Barley	nucleus	35.03	11.39
Os03t0625933-00	Rice	nucleus	17.77	10.64
Os08t0540300-01	Rice	nucleus	29.44	9.56
Os09t0513800-01	Rice	cytosol, mitochondrion, nucleus	25.89	9.38
EES08947	Sorghum	nucleus	43.15	7.83
Zm00001d007709_P003	Maize	nucleus	39.09	7.48
Os03t0626100-01	Rice	nucleus	19.8	6.84
Os03t0233500-01	Rice	nucleus	20.3	6.54
Os03t0625800-01	Rice	cytosol	17.26	6.3
Os04t0492100-01	Rice	nucleus	10.66	4.45
HORVU3Hr1G049680.1	Barley	nucleus	8.12	4.41
HORVU5Hr1G089940.1	Barley	cytosol	3.55	2.1

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.2	UniProt:A0A0P0XQD5	ProteinID:BAT09385.1	InterPro:E3_UB_ligase_RBR	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR013083	EnsemblPlantsGene:Os09g0559100	EnsemblPlants:Os09t0559100-00
PANTHER:PTHR11685	PANTHER:PTHR11685:SF216	SUPFAM:SSF57850	UniParc:UPI000393BF00	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0559100-00)

Coordinates

chr9:-:22223086..22224816

Molecular Weight (calculated)

21563.5 Da

IEP (calculated)

4.178

GRAVY (calculated)

-0.585

Length

197 amino acids

Sequence
(BLAST)

001: MASDGEDDAQ SYESYYTDDG DDYTDEVDSN VDDDGESWDL EEEEVDDDDD DEAKKKKAAA AVNLTKIDRR YRNLSEEQVR ARQDADTANV GELFAIPPGF
101: AAVLLRHYKW SLVELQDRLF CDGDRAGAAT GVALGGAPVS RNAHPLVCAI CFDEHPAGEM RSAGCSHFYC VGCWRGYVHA APVVPVPGPS VLRRRGA

Best Arabidopsis Sequence Match ( AT1G05890.1 )
(BLAST)

001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN

Arabidopsis Description

ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.