Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES08942 | Sorghum | cytosol | 56.66 | 54.51 |
| HORVU3Hr1G019640.1 | Barley | cytosol, peroxisome, plastid | 21.39 | 53.52 |
| Os09t0559000-00 | Rice | cytosol | 52.53 | 53.33 |
| OQU83975 | Sorghum | nucleus | 57.97 | 51.76 |
| TraesCS6B01G472300.1 | Wheat | nucleus | 53.66 | 50.44 |
| TraesCS6A01G417200.1 | Wheat | nucleus | 53.28 | 50.0 |
| TraesCS6D01G402400.1 | Wheat | nucleus | 52.72 | 49.82 |
| EES08939 | Sorghum | nucleus | 55.72 | 45.21 |
| HORVU3Hr1G049680.1 | Barley | nucleus | 30.02 | 44.08 |
| KXG36175 | Sorghum | nucleus | 43.53 | 42.18 |
| HORVU5Hr1G089020.2 | Barley | nucleus | 44.47 | 39.11 |
| HORVU5Hr1G089940.1 | Barley | cytosol | 24.02 | 38.44 |
| Os09t0559100-00 | Rice | nucleus | 13.32 | 36.04 |
| EES11042 | Sorghum | nucleus | 37.71 | 34.13 |
| EES15269 | Sorghum | nucleus | 37.15 | 33.22 |
| EES08947 | Sorghum | nucleus | 55.35 | 27.19 |
| EER93787 | Sorghum | nucleus | 22.33 | 22.24 |
| EER92613 | Sorghum | nucleus | 23.08 | 20.36 |
| EER93790 | Sorghum | nucleus | 20.45 | 20.11 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | UniProt:A0A1Z5RKR7 | ncoils:Coil | InterPro:E3_UB_ligase_RBR |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 |
| InterPro:IBR_dom | InterPro:IPR013083 | EnsemblPlants:OQU83976 | ProteinID:OQU83976 | ProteinID:OQU83976.1 | PFAM:PF01485 |
| ScanProsite:PS00518 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF216 | SMART:SM00647 | EnsemblPlantsGene:SORBI_3005G208801 | SUPFAM:SSF57850 |
| UniParc:UPI000B8BAABF | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:+:69533767..69535365
Molecular Weight (calculated)
58927.1 Da
IEP (calculated)
4.630
GRAVY (calculated)
-0.451
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTAGYEYDD DDDDGYGEDD DYTFDDTCDY DDDVQTTEVN AADGADEEEE QRYVVLTEDA VRARQEAETA KVAEILSIPR GFAAVLLRHF KWSAGRGQEE
101: WFSDDARVRA AIGLPADGVP VPTVVSRAEL SCAICFVDHP AGKTRSAGCA HFYCGECWRA YIRAAVDDGA RCLALRCPDP SCHAAVVQEL VDVAADAKDR
201: ERYARFTLRS FVEEGSSGGG AGGGGRIKWC PGAGCTRAVE FLGGAAAAAA DVFCACRHGF CWSCGEEAHR PVTCDTVRAW LDKNASYTET SNWVLANTKH
301: CPRCRLPIEK NQGCMHMTCP PPCGHEFCWV CLDSWDNHTG CAGFDGGGNG GRQEEGETAT ARQQSRSQAA MDMDRYVYHY ERWAANYSSL ENVFKDMAHL
401: ESSEIERIAA VSGQPAASFA FLSKAYEEIA HGRRVLKWAN AYGYYLDPVR DAAKRGLFED LLDQANSQLE RLHAAAELER RELFCSDAEP AVVRDLLKYY
501: KDRVESYTTA TRTFLRNLVK AFETTDLPEF KSL
101: WFSDDARVRA AIGLPADGVP VPTVVSRAEL SCAICFVDHP AGKTRSAGCA HFYCGECWRA YIRAAVDDGA RCLALRCPDP SCHAAVVQEL VDVAADAKDR
201: ERYARFTLRS FVEEGSSGGG AGGGGRIKWC PGAGCTRAVE FLGGAAAAAA DVFCACRHGF CWSCGEEAHR PVTCDTVRAW LDKNASYTET SNWVLANTKH
301: CPRCRLPIEK NQGCMHMTCP PPCGHEFCWV CLDSWDNHTG CAGFDGGGNG GRQEEGETAT ARQQSRSQAA MDMDRYVYHY ERWAANYSSL ENVFKDMAHL
401: ESSEIERIAA VSGQPAASFA FLSKAYEEIA HGRRVLKWAN AYGYYLDPVR DAAKRGLFED LLDQANSQLE RLHAAAELER RELFCSDAEP AVVRDLLKYY
501: KDRVESYTTA TRTFLRNLVK AFETTDLPEF KSL
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.