Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007709_P003 | Maize | nucleus | 67.37 | 71.04 |
| EES08939 | Sorghum | nucleus | 36.68 | 60.58 |
| TraesCS6D01G402400.1 | Wheat | nucleus | 30.05 | 57.8 |
| Os09t0559000-00 | Rice | cytosol | 27.74 | 57.33 |
| TraesCS6A01G417200.1 | Wheat | nucleus | 29.86 | 57.04 |
| TraesCS6B01G472300.1 | Wheat | nucleus | 29.68 | 56.79 |
| EES08942 | Sorghum | cytosol | 28.48 | 55.78 |
| OQU83976 | Sorghum | cytosol | 27.19 | 55.35 |
| OQU83975 | Sorghum | nucleus | 29.12 | 52.93 |
| HORVU3Hr1G019640.1 | Barley | cytosol, peroxisome, plastid | 10.23 | 52.11 |
| HORVU3Hr1G049680.1 | Barley | nucleus | 16.04 | 47.93 |
| HORVU5Hr1G089940.1 | Barley | cytosol | 14.47 | 47.15 |
| KXG36175 | Sorghum | nucleus | 22.58 | 44.55 |
| HORVU5Hr1G089020.2 | Barley | nucleus | 24.79 | 44.39 |
| Os09t0559100-00 | Rice | nucleus | 7.83 | 43.15 |
| EES11042 | Sorghum | nucleus | 21.94 | 40.41 |
| EES15269 | Sorghum | nucleus | 21.2 | 38.59 |
| EER93790 | Sorghum | nucleus | 11.89 | 23.8 |
| EER92613 | Sorghum | nucleus | 12.81 | 23.01 |
| EER93787 | Sorghum | nucleus | 11.24 | 22.8 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:15.3.3.5.1 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | UniProt:C5Y7J0 | ncoils:Coil |
| InterPro:E3_UB_ligase_RBR | EnsemblPlants:EES08947 | ProteinID:EES08947 | ProteinID:EES08947.2 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0043565 | GO:GO:0046872 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 |
| PFAM:PF01485 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF216 | SMART:SM00647 | EnsemblPlantsGene:SORBI_3005G210000 |
| SUPFAM:SSF57850 | UniParc:UPI0003C6765D | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr5:+:69680347..69685867
Molecular Weight (calculated)
120470.0 Da
IEP (calculated)
6.325
GRAVY (calculated)
-0.606
Length
1085 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASGGGGGVG VCNKRYRRSD GDDDDGETSG RNKRCGVGPS SGPNDDGESG DFFDGWHAAD DDGAGGGEDY MYGYDEDEDE ADQSAEGDAA DASASDDTEQ
0101: RYVVLTESDV RARQEADTAK VAEVLSIPSG FAAVLLRHFK WRVGRVQEEW FTDERRVRAA VGLPAPEHGD ELVPCTRSAR AEVCGICFDP YPAGRTRSAG
0201: CGHYYCDGCW AGYVAAAVGD GPRCLSMRCP DPSCSAPVVR ELVDKVLAAG AKERARYARF WLRSYVEESG GRIKWCGGAG CNRSVEVLGD AADAAAATDV
0301: FCDSGCRHGF CWACGEEAHR PVSCGTVRAW LAKNASDSET ANWVVAHTKR CPKCRRPIEK NHGCNHMTCG APCRHQFCWL CFDPWDNHRG CTRYDYRQRQ
0401: QVEAAAADEE EARRRHAKES LERYLYHYER WAGNGKSLHK ALADADELER SELERMARMV DVPAMELGFV TEAYRQIADG RRVLRWAHAY AYFLFLDPER
0501: DGAKRDLFDD LQSQANRWLE CLHSCAELER KELFGGGANG DGEPSTVVAV EAFRAYKEKV ANLTGVTRKF MGNLVKAFKT NLPEVVVTPA AFDFDHIVNG
0601: PTMGSQTAGV GGIISTATVT LEQPAMEPMV SGSAGFWHSA LQQPSSSSLI SQEANIANDS VQEHRPIRSP VQHPVRPGRH GGLLSNPSQF QPIHSTFFGE
0701: ATTSMGPPNI GAITPLQFNM SNMISSGATS TPLVTFSMSA PGQPIGNQDM VQSTALGSFG SNTSTAWDNS DIAESSSQPN SMAMNRQAGI NPLSSAMNAP
0801: IGMHHNAQQP PPKYVKIWEG TLSGQRQGRP VFISRLEGWS GIVSKTVAAD WPETMQIVRL IAQEHMNNKQ YVGKADFLIF RTLNQHGFLG QLQERKLCAV
0901: IQLPSQTLLL SMSDKAGRMI GMLFPENMVI FKPEVVTQPS LVRQEKLQQP QELLHHQQIQ LQQQQKQQMQ QMLHQRQHMR ASTQNLPMQQ QKLHQQQLQH
1001: QEQLHLQQQL IQHMQQQQPQ YHQHLQQQIQ HQQQLIQQIQ QLRHQQQHMH QMQPQQQPLP QMVDTELGND DDAREDWVTE PGQHA
0101: RYVVLTESDV RARQEADTAK VAEVLSIPSG FAAVLLRHFK WRVGRVQEEW FTDERRVRAA VGLPAPEHGD ELVPCTRSAR AEVCGICFDP YPAGRTRSAG
0201: CGHYYCDGCW AGYVAAAVGD GPRCLSMRCP DPSCSAPVVR ELVDKVLAAG AKERARYARF WLRSYVEESG GRIKWCGGAG CNRSVEVLGD AADAAAATDV
0301: FCDSGCRHGF CWACGEEAHR PVSCGTVRAW LAKNASDSET ANWVVAHTKR CPKCRRPIEK NHGCNHMTCG APCRHQFCWL CFDPWDNHRG CTRYDYRQRQ
0401: QVEAAAADEE EARRRHAKES LERYLYHYER WAGNGKSLHK ALADADELER SELERMARMV DVPAMELGFV TEAYRQIADG RRVLRWAHAY AYFLFLDPER
0501: DGAKRDLFDD LQSQANRWLE CLHSCAELER KELFGGGANG DGEPSTVVAV EAFRAYKEKV ANLTGVTRKF MGNLVKAFKT NLPEVVVTPA AFDFDHIVNG
0601: PTMGSQTAGV GGIISTATVT LEQPAMEPMV SGSAGFWHSA LQQPSSSSLI SQEANIANDS VQEHRPIRSP VQHPVRPGRH GGLLSNPSQF QPIHSTFFGE
0701: ATTSMGPPNI GAITPLQFNM SNMISSGATS TPLVTFSMSA PGQPIGNQDM VQSTALGSFG SNTSTAWDNS DIAESSSQPN SMAMNRQAGI NPLSSAMNAP
0801: IGMHHNAQQP PPKYVKIWEG TLSGQRQGRP VFISRLEGWS GIVSKTVAAD WPETMQIVRL IAQEHMNNKQ YVGKADFLIF RTLNQHGFLG QLQERKLCAV
0901: IQLPSQTLLL SMSDKAGRMI GMLFPENMVI FKPEVVTQPS LVRQEKLQQP QELLHHQQIQ LQQQQKQQMQ QMLHQRQHMR ASTQNLPMQQ QKLHQQQLQH
1001: QEQLHLQQQL IQHMQQQQPQ YHQHLQQQIQ HQQQLIQQIQ QLRHQQQHMH QMQPQQQPLP QMVDTELGND DDAREDWVTE PGQHA
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.