Factsheet for Os09t0513800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G298200.1	Wheat	nucleus	69.49	67.5
TraesCS5D01G305000.1	Wheat	nucleus	69.3	67.08
TraesCS5B01G297300.1	Wheat	nucleus	69.12	66.9
HORVU5Hr1G078470.2	Barley	nucleus	68.57	66.85
Os08t0540300-01	Rice	nucleus	71.51	64.09
Os04t0492100-01	Rice	nucleus	53.86	62.08
Os09t0559000-00	Rice	cytosol	38.6	40.0
Os09t0559100-00	Rice	nucleus	9.38	25.89
Os03t0625933-00	Rice	nucleus	15.07	24.92
Os03t0625800-01	Rice	cytosol	21.69	21.85
Os03t0626100-01	Rice	nucleus	22.79	21.75
Os03t0233500-01	Rice	nucleus	24.26	21.57

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:2.20.28.140	Gene3D:3.30.40.10	ProteinID:BAF25568.1	ProteinID:BAT08937.1
ncoils:Coil	InterPro:E3_UB_ligase_RBR	GO:GO:0000151	GO:GO:0000209	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031624	GO:GO:0032436	GO:GO:0046872
GO:GO:0061630	InterPro:IBR_dom	InterPro:IPR001876	InterPro:IPR013083	EnsemblPlantsGene:Os09g0513800	EnsemblPlants:Os09t0513800-01
PFAM:PF01485	ScanProsite:PS01358	PFscan:PS50199	PANTHER:PTHR11685	PANTHER:PTHR11685:SF219	UniProt:Q0J0E7
SMART:SM00547	SMART:SM00647	SUPFAM:SSF57850	SUPFAM:SSF90209	UniParc:UPI0000DD981B	InterPro:Znf_RING/FYVE/PHD
InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	SEG:seg	:	:	:

Description

Similar to H0425E08.1 protein. (Os09t0513800-01)

Coordinates

chr9:+:20001090..20006561

Molecular Weight (calculated)

61664.8 Da

IEP (calculated)

7.585

GRAVY (calculated)

-0.551

Length

544 amino acids

Sequence
(BLAST)

001: GRRGRLHARA GARYVVLTED DIRERQEEMI SRVSAIFSVP RESACVLLRH YKWSISKLSD DWFADEENVR RSVGLPSNVV HVPDCPELTC GICFEGCAAN
101: AMSCAGCSHF YCHECWEGYI SAAVNDGPGC LVLQCPEPSC DAIVLEDMIN SLTKDEDKVK YARFVLWSYI GVNNKIKWCP APDCTCAVEF LGDGNYDVSC
201: KCKFSFCWNC AEEAHRPVSC DTVSKWILKN SAESENMNWI LAYSKPCPKC KRPIEKNQGC MHMTCTPPCK FEFCWLCLGA WSDHGDGTGG FYACNRYQSA
301: KMGGMYDEAE ARRERAKNSL ERYMHYYERW ASNQTSRQKA QADLQKVENE DLTKLSDVVG IPETQLKFIP EAWSQIIECR RVLKWTYAYG YYLHNKAKSD
401: FFVYLQGEAE SGLERLHKCA EKDMREFLPT ADSTQPSLSL QDFGEFRVKL SGLTSVTRNY FENLVQTLEA GLQDVRATDQ SASVSTSSSK KPPTNTKGKS
501: GRSKVARTSQ ERSGDRWPCD RCTFINPSST NSCNMCGRNK PRRR

Best Arabidopsis Sequence Match ( AT1G65430.1 )
(BLAST)

001: MEADDDFYSG TENYSDYADS DEDDADGEYE FVDDAADDSD DLIFRRRQQN YSVLSEADIC KLQEDDISRI STVLSISRNS SAILLRHYNW CVSRVHDEWF
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR

Arabidopsis Description

ARI8ATARI8 [Source:UniProtKB/TrEMBL;Acc:A0A178WLP2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.