Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038933 | Potato | nucleus | 90.51 | 14.17 |
| Solyc06g073340.2.1 | Tomato | nucleus | 40.15 | 10.0 |
| Solyc11g008580.1.1 | Tomato | nucleus | 37.96 | 8.8 |
| Solyc01g005650.1.1 | Tomato | nucleus | 30.66 | 8.05 |
| Solyc04g079780.2.1 | Tomato | cytosol | 13.87 | 3.64 |
| Solyc12g089000.1.1 | Tomato | nucleus | 13.87 | 3.54 |
| Solyc01g109280.2.1 | Tomato | nucleus | 14.6 | 3.39 |
| Solyc01g044350.2.1 | Tomato | mitochondrion | 4.38 | 2.02 |
Protein Annotations
| EnsemblPlants:Solyc01g044340.2.1 | EnsemblPlantsGene:Solyc01g044340.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:E3_UB_ligase_RBR | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SEG:seg | UniParc:UPI000276315E | UniProt:K4AVB5 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:43254272..43259371
Molecular Weight (calculated)
15348.4 Da
IEP (calculated)
3.990
GRAVY (calculated)
-0.642
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MENDIDMYDG TDVDSAGDDL YGDDFINGGD SGSESSGDDI IDNDPDDLPH DKNYVVLSDD DIGRLMDDDI SKVSSVLSVS RTDASALLRR YNWSVNKVHE
101: EWFADESNVR EAVGLKIQEK VVHSRENPLV KLLFHRI
101: EWFADESNVR EAVGLKIQEK VVHSRENPLV KLLFHRI
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTR
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTR
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.