Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g008690.1.1 | Tomato | extracellular | 36.84 | 20.94 |
| Solyc10g085740.1.1 | Tomato | extracellular | 39.1 | 14.94 |
| Solyc03g121180.2.1 | Tomato | nucleus | 36.84 | 13.65 |
| Solyc11g066700.1.1 | Tomato | extracellular, plasma membrane | 35.34 | 13.24 |
| Solyc03g121170.2.1 | Tomato | nucleus | 37.59 | 11.99 |
| PGSC0003DMT400020220 | Potato | cytosol | 15.04 | 6.17 |
| HORVU3Hr1G089960.1 | Barley | plastid | 4.51 | 2.93 |
| AT2G31550.1 | Thale cress | cytosol | 1.5 | 0.91 |
| CDY15393 | Canola | cytosol | 0.75 | 0.45 |
| KRH72762 | Soybean | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400027844 | Potato | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc05g043310.1.1 | EnsemblPlantsGene:Solyc05g043310.1 | Gene3D:3.40.50.1110 | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF276 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI00027666E3 | UniProt:K4C0L3 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5:+:55928185..55928665
Molecular Weight (calculated)
14741.8 Da
IEP (calculated)
5.717
GRAVY (calculated)
0.393
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAYNFMPCI ILFFVQIIIP FVVGGKVPAI IVFGDSTVDT GNNNQILTVL KSNFPPYGRD YYDNKATGRF CNGRIPPDFI SEAFGLRPFV PAYLDPMYNI
101: TDFAVGVCFA SAGTGYDTAT SHVLAWLCYF FCS
101: TDFAVGVCFA SAGTGYDTAT SHVLAWLCYF FCS
001: MGHLKSLFTI LFLIAMSSTV TFAGKIPAII VFGDSSVDAG NNNYIPTVAR SNFEPYGRDF VGGKPTGRFC NGKIATDFMS EALGLKPIIP AYLDPSYNIS
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL
101: DFATGVTFAS AATGYDNATS DVLSVLPLWK QLEYYKEYQT KLKAYQGKDR GTETIESSLY LISIGTNDFL ENYFAFPGRS SQYSVSLYQD FLAGIAKEFV
201: KKLHGLGARK ISLGGLPPMG CMPLERATNI GTGGECVGRY NDIAVQFNSK LDKMVEKLSK ELPGSNLVFS NPYEPFMRII KNPSSFGFEV VGAACCATGM
301: FEMGYGCQRN NPFTCTNADK YVFWDSFHPT QKTNHIMANA LMNSTFPHFL
Arabidopsis Description
GDSL esterase/lipase At2g04570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJB4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.