Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400033798 | Potato | extracellular | 93.16 | 93.16 |
| Solyc10g085740.1.1 | Tomato | extracellular | 67.52 | 45.4 |
| VIT_08s0007g04300.t01 | Wine grape | extracellular, vacuole | 65.81 | 42.42 |
| Solyc11g066700.1.1 | Tomato | extracellular, plasma membrane | 56.41 | 37.18 |
| CDX95394 | Canola | extracellular | 55.56 | 37.04 |
| CDX76226 | Canola | extracellular, plasma membrane | 55.56 | 37.04 |
| Bra040686.1-P | Field mustard | extracellular, plasma membrane | 55.56 | 37.04 |
| Solyc05g043310.1.1 | Tomato | extracellular | 20.94 | 36.84 |
| GSMUA_Achr4P17640_001 | Banana | extracellular, plasma membrane | 55.98 | 36.59 |
| AT3G53100.1 | Thale cress | extracellular | 54.7 | 36.47 |
| GSMUA_Achr2P12520_001 | Banana | plastid | 55.13 | 32.58 |
| TraesCS4A01G285700.1 | Wheat | endoplasmic reticulum, plasma membrane | 48.72 | 32.29 |
| Os03t0683800-01 | Rice | plastid | 48.72 | 31.93 |
| TraesCS4D01G024900.1 | Wheat | endoplasmic reticulum, plasma membrane | 48.72 | 31.49 |
| TraesCS4B01G027100.1 | Wheat | endoplasmic reticulum, plasma membrane | 48.72 | 31.32 |
| EER93662 | Sorghum | endoplasmic reticulum, plasma membrane | 48.29 | 31.22 |
| Solyc03g121180.2.1 | Tomato | nucleus | 47.86 | 31.2 |
| HORVU4Hr1G004100.1 | Barley | endoplasmic reticulum, plasma membrane | 48.72 | 31.06 |
| Zm00001d033522_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 47.01 | 30.64 |
| Solyc03g121170.2.1 | Tomato | nucleus | 48.29 | 27.1 |
Protein Annotations
| EnsemblPlants:Solyc09g008690.1.1 | EnsemblPlantsGene:Solyc09g008690.1 | Gene3D:3.40.50.1110 | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | PANTHER:PTHR22835 |
| PANTHER:PTHR22835:SF146 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000276C0EA | UniProt:K4CQQ4 | MapMan:35.1 |
Description
No Description!
Coordinates
chr9:+:2133254..2134135
Molecular Weight (calculated)
26502.0 Da
IEP (calculated)
10.081
GRAVY (calculated)
-0.066
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLMSVLSG FLLAMVFSVS NGDPLVPALC IFGDSVVDVG NNNNLSTLIK ANFPPYGRDF VNHKPTGRFC NGKLATDYTA EYLGFTSYPP AYLSREARGK
101: KVLTGVNFAS AASGYYERTA RLFRALTLTR QLKYYKLWQR KVVNLVGRTN ATNIFSRGIH ILSAGSSDFM QNYYINPLLN RVYSPAQFSD ILMKSYSTFV
201: QVQLPLLCTI RYRFFNCYHK QILKSEQPAR NYYA
101: KVLTGVNFAS AASGYYERTA RLFRALTLTR QLKYYKLWQR KVVNLVGRTN ATNIFSRGIH ILSAGSSDFM QNYYINPLLN RVYSPAQFSD ILMKSYSTFV
201: QVQLPLLCTI RYRFFNCYHK QILKSEQPAR NYYA
001: MQKMRVSGFR VLLLVSCFFC KSKGAVVPAL IMFGDSIVDV GNNNNLLSIV KSNFLPYGRD FIDQRPTGRF CNGKLAVDFS AEYLGFSSYP PAFLSREASN
101: ENILIGANFA SASSGYYDAT SVPFGSISLT RQLSYYRAYQ NRVTRMIGRG NARILFSRGI HILSAGSSDF LQNYYINPLL NILNTPDQFA DILLRSFSEF
201: IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER LNNDAIMFNT KLENTTRLLM NRHSGLRLVA FNVYQPFLDI ITNPTDNGFF ETKRACCGTG
301: TIETSFLCNS LSFGTCVNAT GYVFWDGFHP TEAVNELLAG QLLGQGISLI N
101: ENILIGANFA SASSGYYDAT SVPFGSISLT RQLSYYRAYQ NRVTRMIGRG NARILFSRGI HILSAGSSDF LQNYYINPLL NILNTPDQFA DILLRSFSEF
201: IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER LNNDAIMFNT KLENTTRLLM NRHSGLRLVA FNVYQPFLDI ITNPTDNGFF ETKRACCGTG
301: TIETSFLCNS LSFGTCVNAT GYVFWDGFHP TEAVNELLAG QLLGQGISLI N
Arabidopsis Description
GDSL esterase/lipase At3g53100 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPI9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.