Factsheet for Bra040686.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76226	Canola	extracellular, plasma membrane	99.72	99.72
AT3G53100.1	Thale cress	extracellular	87.46	87.46
Bra005781.1-P	Field mustard	plastid	39.03	65.55
PGSC0003DMT400088508	Potato	extracellular	29.34	64.78
PGSC0003DMT400021670	Potato	extracellular	60.97	61.49
Solyc10g085740.1.1	Tomato	extracellular	60.4	60.92
Bra005782.1-P	Field mustard	extracellular, plasma membrane	60.97	60.62
VIT_08s0007g04300.t01	Wine grape	extracellular, vacuole	61.54	59.5
Bra028818.1-P	Field mustard	extracellular, plasma membrane	58.4	58.57
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	58.12	56.98
Bra020216.1-P	Field mustard	extracellular	56.98	55.56
Solyc09g008690.1.1	Tomato	extracellular	37.04	55.56
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	55.56	55.24
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	56.7	54.97
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	56.13	54.87
Os03t0683800-01	Rice	plastid	55.27	54.34
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	55.56	53.87
PGSC0003DMT400033798	Potato	extracellular	35.9	53.85
TraesCS4B01G027100.1	Wheat	endoplasmic reticulum, plasma membrane	55.56	53.57
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	55.56	53.13
GSMUA_Achr2P12520_001	Banana	plastid	58.69	52.02
Bra027168.1-P	Field mustard	extracellular	51.28	50.85
Bra029234.1-P	Field mustard	plasma membrane	32.19	33.43
Bra024605.1-P	Field mustard	extracellular	30.77	32.05
Bra012377.1-P	Field mustard	extracellular	30.2	31.09
Bra008229.1-P	Field mustard	extracellular, plasma membrane	27.35	28.15
Bra014533.1-P	Field mustard	cytosol, mitochondrion	13.96	24.62

Protein Annotations

EnsemblPlants:Bra040686.1	EnsemblPlants:Bra040686.1-P	EnsemblPlantsGene:Bra040686	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF146	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
TMHMM:TMhelix	UniParc:UPI0002545456	UniProt:M4FHV7	MapMan:35.1	:	:

Description

AT3G53100 (E=3e-169) | GDSL-motif lipase/hydrolase family protein

Coordinates

chrA04:+:3995542..3997067

Molecular Weight (calculated)

38984.7 Da

IEP (calculated)

7.908

GRAVY (calculated)

0.003

Length

351 amino acids

Sequence
(BLAST)

001: MQEMRVSRFW VLVLVSCFFC KSKGAIVPAL IMFGDSIVDV GNNNNLLSIV KSNFPPYGRD FTNQTPTGRF CNGKLAVDFS AEYLGFSSYP PAFLNREARN
101: EDFLIGANFA SASSGYYDAT SVPFGAIPLT RQLSYYRTYQ NRVRSMIGRE RARTMFSQSI HILSAGSSDF LQNYYINPLL NILNTPEQFS DTLMRSYSEF
201: IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER LNNDAVMFNT KLESTTQTLM KRHSGLKLVA FNAYQPLMDI ITNPYDNGFF ETKRACCGTG
301: TIETSFLCNS LSLGTCSNAT GYVFWDGFHP TEAVYELLAG QLLSQGISLI S

Best Arabidopsis Sequence Match ( AT3G53100.1 )
(BLAST)

001: MQKMRVSGFR VLLLVSCFFC KSKGAVVPAL IMFGDSIVDV GNNNNLLSIV KSNFLPYGRD FIDQRPTGRF CNGKLAVDFS AEYLGFSSYP PAFLSREASN
101: ENILIGANFA SASSGYYDAT SVPFGSISLT RQLSYYRAYQ NRVTRMIGRG NARILFSRGI HILSAGSSDF LQNYYINPLL NILNTPDQFA DILLRSFSEF
201: IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER LNNDAIMFNT KLENTTRLLM NRHSGLRLVA FNVYQPFLDI ITNPTDNGFF ETKRACCGTG
301: TIETSFLCNS LSFGTCVNAT GYVFWDGFHP TEAVNELLAG QLLGQGISLI N

Arabidopsis Description

GDSL esterase/lipase At3g53100 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPI9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.