Factsheet for VIT_08s0007g04300.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400088508	Potato	extracellular	33.61	76.73
PGSC0003DMT400021670	Potato	extracellular	73.28	76.44
Solyc10g085740.1.1	Tomato	extracellular	72.18	75.29
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	66.67	67.6
PGSC0003DMT400033798	Potato	extracellular	43.25	67.09
Solyc09g008690.1.1	Tomato	extracellular	42.42	65.81
AT3G53100.1	Thale cress	extracellular	59.78	61.82
CDX95394	Canola	extracellular	59.78	61.82
Bra040686.1-P	Field mustard	extracellular, plasma membrane	59.5	61.54
CDX76226	Canola	extracellular, plasma membrane	59.5	61.54
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	58.13	59.77
Os03t0683800-01	Rice	plastid	58.4	59.38
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	58.68	58.84
TraesCS4B01G027100.1	Wheat	endoplasmic reticulum, plasma membrane	58.4	58.24
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	58.68	58.04
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	57.85	58.01
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	57.3	57.94
VIT_09s0002g03140.t01	Wine grape	extracellular	55.92	57.02
GSMUA_Achr2P12520_001	Banana	plastid	61.43	56.31
VIT_09s0002g03050.t01	Wine grape	extracellular	15.43	53.33
VIT_09s0002g03150.t01	Wine grape	extracellular	50.69	51.83

Protein Annotations

EntrezGene:100242529	wikigene:100242529	Gene3D:3.40.50.1110	MapMan:35.1	ProteinID:CBI30208	ProteinID:CBI30208.3
UniProt:D7TIY2	EMBL:FN595991	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:IPR036514	EntrezGene:LOC100242529	wikigene:LOC100242529	PFAM:PF00657	PANTHER:PTHR22835
PANTHER:PTHR22835:SF146	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001BE3828
ArrayExpress:VIT_08s0007g04300	EnsemblPlantsGene:VIT_08s0007g04300	EnsemblPlants:VIT_08s0007g04300.t01	RefSeq:XP_002284087	RefSeq:XP_002284087.2	SEG:seg

Description

No Description!

Coordinates

chr8:-:18265208..18269165

Molecular Weight (calculated)

39533.2 Da

IEP (calculated)

8.298

GRAVY (calculated)

0.057

Length

363 amino acids

Sequence
(BLAST)

001: MGFARNALGA FLLLVLILSV AHGDPLVPAL CIFGDSVVDA GNNNNLATLV KANFPPYGRD FVTHRPTGRF CNGKLATDFT AEYLGFTSYP PPYLSQEAQG
101: KNLLQGANFA SASSGYYDRT AQLYRAISLT QQVEYYKEYQ AKVVRLVGKA RAHDIFSGGI HLLSAGSSDF VQNYYINPLL NRAYSADQFS DLLMKSYTTF
201: VQNLYGLGVR KIGVTTLPPT GCLPAAITLF SSGSNQCVAR LNQDAINFNS KLNITSQVLQ NKLPGLKLVV FDIYQPLLNL ITKPTDNGFF ESRKACCGTG
301: TIETSLLCNA RSVGTCSNAS QYVFWDGFHP SESANQLLAG SLLEQGINLI GHHVLWVNAC FNL

Best Arabidopsis Sequence Match ( AT5G03820.1 )
(BLAST)

001: MNKMKMFIIM LMTFSVIACF YAGVGTGEPL VPALIIMGDS VVDAGNNNRL NTLIKANFPP YGRDFLAHNA TGRFSNGKLA TDFTAESLGF TSYPVPYLSQ
101: EANGTNLLTG ANFASGASGY DDGTAIFYNA ITLNQQLKNY KEYQNKVTNI VGSERANKIF SGAIHLLSTG SSDFLQSYYI NPILNRIFTP DQYSDRLMKP
201: YSTFVQNLYD LGARKIGVTT LPPLGCLPAA ITLFGETGNN NTCVERLNQD AVSFNTKLNN TSMNLTNNLP GLKLVVFDIY NPLLNMAMNP VENGFFESRR
301: ACCGTGTVET SFLCNARSVG TCSNATNYVF WDGFHPSEAA NRVIANNLLV QGIPLIS

Arabidopsis Description

GDSL-like Lipase/Acylhydrolase family protein [Source:TAIR;Acc:AT5G03820]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.