Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0002g03140.t01 | Wine grape | extracellular | 78.1 | 23.03 |
| VIT_09s0002g03150.t01 | Wine grape | extracellular | 65.71 | 19.44 |
| VIT_08s0007g04300.t01 | Wine grape | extracellular, vacuole | 53.33 | 15.43 |
| CDY54290 | Canola | extracellular | 34.29 | 11.96 |
| CDY43409 | Canola | extracellular, plasma membrane | 37.14 | 11.47 |
| AT5G63170.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 36.19 | 11.24 |
| CDY45740 | Canola | plasma membrane | 36.19 | 11.24 |
| CDY30744 | Canola | extracellular | 36.19 | 11.24 |
| KRH05981 | Soybean | extracellular | 39.05 | 11.2 |
| KRH17464 | Soybean | extracellular | 39.05 | 11.17 |
| AT1G73610.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 36.19 | 11.05 |
| Bra029234.1-P | Field mustard | plasma membrane | 35.24 | 10.95 |
| CDX96486 | Canola | extracellular, plasma membrane | 35.24 | 10.91 |
| AT1G75910.1 | Thale cress | endoplasmic reticulum, plasma membrane | 35.24 | 10.79 |
| AT1G75920.1 | Thale cress | plasma membrane | 36.19 | 10.76 |
| Bra024605.1-P | Field mustard | extracellular | 34.29 | 10.68 |
| CDX72994 | Canola | extracellular | 34.29 | 10.62 |
| HORVU1Hr1G065930.2 | Barley | mitochondrion | 40.0 | 10.55 |
| CDY44153 | Canola | cytosol | 35.24 | 10.51 |
| AT1G75930.1 | Thale cress | extracellular, plasma membrane | 34.29 | 10.5 |
| AT1G23500.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 34.29 | 10.43 |
| CDY04705 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 35.24 | 10.42 |
| AT1G20135.1 | Thale cress | extracellular, plasma membrane | 32.38 | 10.37 |
| CDY67584 | Canola | extracellular, plasma membrane | 33.33 | 10.26 |
| CDY25788 | Canola | extracellular | 33.33 | 10.26 |
| CDY39069 | Canola | extracellular, plasma membrane | 33.33 | 10.26 |
| CDY13524 | Canola | extracellular, plasma membrane | 33.33 | 10.26 |
| Bra012377.1-P | Field mustard | extracellular | 33.33 | 10.26 |
| Bra008229.1-P | Field mustard | extracellular, plasma membrane | 33.33 | 10.26 |
| CDX89030 | Canola | plasma membrane | 28.57 | 10.0 |
| CDY67583 | Canola | extracellular | 31.43 | 9.62 |
| CDY45771 | Canola | extracellular, plasma membrane | 30.48 | 9.38 |
| CDY54289 | Canola | extracellular | 30.48 | 9.3 |
| CDY57589 | Canola | plasma membrane | 37.14 | 8.35 |
| PGSC0003DMT400076811 | Potato | cytosol | 16.19 | 8.02 |
| CDY13523 | Canola | golgi, plasma membrane, plastid | 20.0 | 6.05 |
| Zm00001d044521_P001 | Maize | cytosol, mitochondrion | 0.95 | 0.73 |
| Zm00001d024117_P001 | Maize | cytosol, mitochondrion | 0.95 | 0.73 |
| CDX85927 | Canola | extracellular, mitochondrion, plastid | 0.95 | 0.72 |
| TraesCS7D01G346800.1 | Wheat | cytosol, extracellular, mitochondrion | 0.95 | 0.71 |
| CDY39070 | Canola | extracellular | 0.95 | 0.68 |
| KRH61021 | Soybean | mitochondrion | 0.95 | 0.62 |
| Bra014533.1-P | Field mustard | cytosol, mitochondrion | 0.95 | 0.5 |
| Os06t0148600-01 | Rice | cytosol, golgi, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_09s0002g03050 | EMBL:FN596494 | EnsemblPlants:VIT_09s0002g03050.t01 | EnsemblPlantsGene:VIT_09s0002g03050 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF134 |
| ProteinID:CCB59395 | ProteinID:CCB59395.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00015C907C |
| UniProt:F6HY72 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:2799091..2799551
Molecular Weight (calculated)
11415.7 Da
IEP (calculated)
7.408
GRAVY (calculated)
0.245
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIHCFWALF LALALAFAII GKAQDTTLVP SIVTFGDSAV DVGNNEYLPT IFKSNYPPYG RDFINHQPTG RFCNGKLATD ITADIFGFKT YPPAYLITKA
101: SGGTF
101: SGGTF
001: MDRCTSSFLL LTLVSTLSIL QISFAQLVPA IMTFGDSVVD VGNNNYLPTL FRADYPPYGR DFANHKATGR FCNGKLATDI TAETLGFTKY PPAYLSPEAS
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG
101: GKNLLIGANF ASAASGYDDK AALLNHAIPL YQQVEYFKEY KSKLIKIAGS KKADSIIKGA ICLLSAGSSD FVQNYYVNPL LYKVYTVDAY GSFLIDNFST
201: FIKQVYAVGA RKIGVTSLPP TGCLPAARTL FGFHEKGCVS RLNTDAQNFN KKLNAAASKL QKQYSDLKIV VFDIYSPLYD LVQNPSKSGF TEATKGCCGT
301: GTVETTSLLC NPKSFGTCSN ATQYVFWDSV HPSEAANEIL ATALIGQGFS LLG
Arabidopsis Description
APGGDSL esterase/lipase APG [Source:UniProtKB/Swiss-Prot;Acc:Q9LU14]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.