Factsheet for PGSC0003DMT400076811

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85927	Canola	extracellular, mitochondrion, plastid	34.43	52.9
KRH61021	Soybean	mitochondrion	37.74	50.0
TraesCS7D01G346800.1	Wheat	cytosol, extracellular, mitochondrion	27.36	41.43
PGSC0003DMT400088508	Potato	extracellular	29.72	39.62
Zm00001d024117_P001	Maize	cytosol, mitochondrion	25.47	39.42
Zm00001d044521_P001	Maize	cytosol, mitochondrion	25.47	39.42
PGSC0003DMT400027844	Potato	extracellular	23.58	33.56
PGSC0003DMT400001233	Potato	extracellular, plasma membrane	44.81	26.91
PGSC0003DMT400021670	Potato	extracellular	43.87	26.72
PGSC0003DMT400006459	Potato	extracellular	41.98	24.79
PGSC0003DMT400006461	Potato	extracellular	37.74	22.28
PGSC0003DMT400020220	Potato	cytosol	26.42	17.28
VIT_09s0002g03050.t01	Wine grape	extracellular	8.02	16.19
HORVU1Hr1G065930.2	Barley	mitochondrion	29.72	15.83
PGSC0003DMT400033798	Potato	extracellular	15.09	13.68
Os06t0148600-01	Rice	cytosol, golgi, nucleus, plastid	0.47	0.25

Protein Annotations

EnsemblPlants:PGSC0003DMT400076811	EnsemblPlantsGene:PGSC0003DMG400029874	EntrezGene:102585401	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	PANTHER:PTHR22835
PANTHER:PTHR22835:SF330	PFAM:PF00657	PGSC:PGSC0003DMG400029874	RefSeq:XP_015167847.1	SUPFAM:SSF52266	UniParc:UPI000296F279
UniProt:M1CXF5	MapMan:35.1	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029874]

Coordinates

chr8:+:13168659..13172500

Molecular Weight (calculated)

22964.8 Da

IEP (calculated)

7.760

GRAVY (calculated)

0.039

Length

212 amino acids

Sequence
(BLAST)

001: MGGKPTGRFT NAKTPSDLIV NELGIKEVMS AYLDPYLRVE DLKTGVSFAS GGCGFDPQTS SIAELYKLGA RKIGVFGVPP IGSLPAQRTL AGGFSRGCVV
101: EYNQAAQLAN TKLSAAIASL SKNLLQSVLV LIDIYNPLLD LIVNPQKHGF EVVDKGCCGS GMIETVILCN KYSGTCEDNT KYLFWDSYHP TEKGYRILVD
201: QILQKYVNIL TT

Best Arabidopsis Sequence Match ( AT1G75880.1 )
(BLAST)

001: MERCRSGHHR IISYYLSSSL ILFWCIFVLV LLSTTSTTNA LVKIPKNTTV PAVIVFGDSI VDAGNNDDMI TEARCDYAPY GIDFDGGVAT GRFSNGKVPG
101: DIVAEELGIK PNIPAYRNPN LKPEELLTGV TFASGGAGYV PLTTKIAVGG IPLPQQLIYF EEYIEKLKQM VGEKRTKFII KNSLFVVICG SNDIANDFFT
201: LPPVRLHYTV ASFTALMADN ARSFAQTLYG YGARRILVFG APPIGCVPSQ RTVAGGPTRD CVARFNDAAK LFNTKLSANI DVLSRTLQDP TIIYIDIYSP
301: LLDLILNPHQ YGFKVANKGC CGTGLIEVTA LCNNYTASVC PIRSDYVFWD SFHPTEKAYR IIVAKLLDRY LNRFF

Arabidopsis Description

EXL1GDSL esterase/lipase EXL1 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH8]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.