CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61021	Soybean	mitochondrion	52.17	45.0
PGSC0003DMT400076811	Potato	cytosol	52.9	34.43
CDY39070	Canola	extracellular	28.26	26.35
CDY15393	Canola	cytosol	34.06	21.36
CDY14175	Canola	extracellular, plasma membrane	39.13	16.51
CDY04898	Canola	extracellular, plasma membrane	38.41	15.14
CDX80889	Canola	extracellular, plasma membrane	37.68	14.73
CDY09169	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.41	14.68
CDX95394	Canola	extracellular	36.96	14.53
CDY50286	Canola	extracellular	37.68	14.44
CDX76226	Canola	extracellular, plasma membrane	36.23	14.24
CDY11271	Canola	extracellular, plasma membrane	37.68	14.17
CDY44153	Canola	cytosol	35.51	13.92
CDX96486	Canola	extracellular, plasma membrane	34.06	13.86
CDY30167	Canola	extracellular	35.51	13.84
CDY04705	Canola	cytosol, mitochondrion, plasma membrane, plastid	35.51	13.8
CDY56196	Canola	vacuole	35.51	13.69
CDX72994	Canola	extracellular	33.33	13.57
CDY30744	Canola	extracellular	32.61	13.31
CDY45740	Canola	plasma membrane	32.61	13.31
CDY25788	Canola	extracellular	32.61	13.2
CDX75880	Canola	vacuole	28.99	12.9
CDY54289	Canola	extracellular	31.88	12.79
CDY43409	Canola	extracellular, plasma membrane	28.99	11.76
CDY67583	Canola	extracellular	28.26	11.37
CDY13523	Canola	golgi, plasma membrane, plastid	28.26	11.24
CDY45771	Canola	extracellular, plasma membrane	26.81	10.85
CDY39069	Canola	extracellular, plasma membrane	24.64	9.97
CDY13524	Canola	extracellular, plasma membrane	24.64	9.97
CDY67584	Canola	extracellular, plasma membrane	24.64	9.97
CDY57589	Canola	plasma membrane	28.99	8.57
CDX89030	Canola	plasma membrane	14.49	6.67
CDY54290	Canola	extracellular	10.14	4.65
CDY15394	Canola	extracellular	2.17	2.46
VIT_09s0002g03050.t01	Wine grape	extracellular	0.72	0.95

Protein Annotations

EnsemblPlants:CDX85927	EnsemblPlantsGene:GSBRNA2T00143764001	Gene3D:3.40.50.1110	GO:A0A078DA03	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	PANTHER:PTHR22835
PANTHER:PTHR22835:SF471	PFAM:PF00657	ProteinID:CDX85927	ProteinID:CDX85927.1	SEG:seg	UniParc:UPI0004EDE764
MapMan:35.1	:	:	:	:	:

Description

BnaC06g22070D

Coordinates

chrLK031843:+:895011..895951

Molecular Weight (calculated)

15450.6 Da

IEP (calculated)

7.681

GRAVY (calculated)

0.112

Length

138 amino acids

Sequence
(BLAST)

001: MFGAPPIGCV PSQRTVAGGP TRDCVVRFND ACKLFNAKLS ANIDGLSRTL QDTTLIYIDI YDPLLDLILY PQQYGFKVSN LGCCGTGFIE VTALCNNYTA
101: AVCPVRSDYV FWDSFHPTET AYRNIVAKLL QRYLNRFF

Best Arabidopsis Sequence Match ( AT1G75880.1 )
(BLAST)

001: MERCRSGHHR IISYYLSSSL ILFWCIFVLV LLSTTSTTNA LVKIPKNTTV PAVIVFGDSI VDAGNNDDMI TEARCDYAPY GIDFDGGVAT GRFSNGKVPG
101: DIVAEELGIK PNIPAYRNPN LKPEELLTGV TFASGGAGYV PLTTKIAVGG IPLPQQLIYF EEYIEKLKQM VGEKRTKFII KNSLFVVICG SNDIANDFFT
201: LPPVRLHYTV ASFTALMADN ARSFAQTLYG YGARRILVFG APPIGCVPSQ RTVAGGPTRD CVARFNDAAK LFNTKLSANI DVLSRTLQDP TIIYIDIYSP
301: LLDLILNPHQ YGFKVANKGC CGTGLIEVTA LCNNYTASVC PIRSDYVFWD SFHPTEKAYR IIVAKLLDRY LNRFF

Arabidopsis Description

EXL1GDSL esterase/lipase EXL1 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH8]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.