Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25788 | Canola | extracellular | 87.21 | 87.98 |
| AT1G23500.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 68.31 | 68.12 |
| CDY44153 | Canola | cytosol | 69.48 | 67.9 |
| CDY04705 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 69.77 | 67.61 |
| CDX72994 | Canola | extracellular | 59.3 | 60.18 |
| CDX96486 | Canola | extracellular, plasma membrane | 58.43 | 59.29 |
| CDY45740 | Canola | plasma membrane | 47.97 | 48.82 |
| CDY30744 | Canola | extracellular | 47.97 | 48.82 |
| CDY43409 | Canola | extracellular, plasma membrane | 46.22 | 46.76 |
| CDY39070 | Canola | extracellular | 18.31 | 42.57 |
| CDY67583 | Canola | extracellular | 42.44 | 42.57 |
| CDY45771 | Canola | extracellular, plasma membrane | 40.41 | 40.76 |
| CDY67584 | Canola | extracellular, plasma membrane | 39.83 | 40.18 |
| CDY13524 | Canola | extracellular, plasma membrane | 39.83 | 40.18 |
| CDY39069 | Canola | extracellular, plasma membrane | 39.83 | 40.18 |
| KRH17464 | Soybean | extracellular | 41.86 | 39.24 |
| CDX89030 | Canola | plasma membrane | 34.01 | 39.0 |
| KRH05981 | Soybean | extracellular | 40.7 | 38.25 |
| CDY13523 | Canola | golgi, plasma membrane, plastid | 35.76 | 35.45 |
| CDY57589 | Canola | plasma membrane | 46.8 | 34.48 |
| CDY14175 | Canola | extracellular, plasma membrane | 31.98 | 33.64 |
| CDY04898 | Canola | extracellular, plasma membrane | 32.85 | 32.29 |
| CDY30167 | Canola | extracellular | 32.85 | 31.92 |
| CDX85927 | Canola | extracellular, mitochondrion, plastid | 12.79 | 31.88 |
| CDY56196 | Canola | vacuole | 32.85 | 31.56 |
| CDX80889 | Canola | extracellular, plasma membrane | 32.27 | 31.44 |
| VIT_09s0002g03050.t01 | Wine grape | extracellular | 9.3 | 30.48 |
| CDY11271 | Canola | extracellular, plasma membrane | 32.27 | 30.25 |
| CDY54290 | Canola | extracellular | 25.87 | 29.57 |
| CDX76226 | Canola | extracellular, plasma membrane | 29.07 | 28.49 |
| CDX95394 | Canola | extracellular | 28.49 | 27.92 |
| CDY50286 | Canola | extracellular | 29.07 | 27.78 |
| CDY09169 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 29.07 | 27.7 |
| CDY15393 | Canola | cytosol | 16.57 | 25.91 |
| CDY15394 | Canola | extracellular | 9.01 | 25.41 |
| CDX75880 | Canola | vacuole | 20.35 | 22.58 |
Protein Annotations
| Gene3D:3.40.50.1110 | MapMan:35.1 | GO:A0A078IY69 | UniProt:A0A078IY69 | EnsemblPlants:CDY54289 | ProteinID:CDY54289 |
| ProteinID:CDY54289.1 | InterPro:GDSL | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016298 | GO:GO:0016787 | GO:GO:0016788 | EnsemblPlantsGene:GSBRNA2T00013769001 | InterPro:IPR036514 |
| InterPro:Lipase_GDSL_AS | PFAM:PF00657 | ScanProsite:PS01098 | PANTHER:PTHR22835 | PANTHER:PTHR22835:SF330 | InterPro:SGNH_hydro_sf |
| InterPro:SGNH_plant_lipase_like | SUPFAM:SSF52266 | SignalP:SignalP-noTM | UniParc:UPI0004EEFF6D | SEG:seg | : |
Description
BnaC07g48300DBnaC07g48300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IY69]
Coordinates
chrLK033299:-:33987..35538
Molecular Weight (calculated)
37642.8 Da
IEP (calculated)
6.021
GRAVY (calculated)
-0.094
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLTLALACV CFFFVGHAHP QGISGNANVS ALFAFGDSIL DTGNNNNLTT LSKCNYFPYG RNFVGGKATG RFGNGRVFSD LIDKTTFNNS HDLTTNQISI
101: LPYLTMIPNL SNNDLPTGVC FASGGSGLDE RTAKPQGVIW VPDQVKDFKE YVTKLNGVLG NQEKTNAIIS NAVYLTSAGN NDLVNNVCYH AYTDLMVTWT
201: ENLLKSLYDM GARKFAVLGT VPLGCLPGIR KIDGDISKLC SVPENQWADT FNKNLSVIFN TLETKLPGAK FSYVDMYNSL LDLVNNPQAS GFTEVADACY
301: MPTTSPIPCP DASRYVFWDR AHPSEKAYQT IAPKIIEEFK DKLA
101: LPYLTMIPNL SNNDLPTGVC FASGGSGLDE RTAKPQGVIW VPDQVKDFKE YVTKLNGVLG NQEKTNAIIS NAVYLTSAGN NDLVNNVCYH AYTDLMVTWT
201: ENLLKSLYDM GARKFAVLGT VPLGCLPGIR KIDGDISKLC SVPENQWADT FNKNLSVIFN TLETKLPGAK FSYVDMYNSL LDLVNNPQAS GFTEVADACY
301: MPTTSPIPCP DASRYVFWDR AHPSEKAYQT IAPKIIEEFK DKLA
001: MENANIKVLV VLLSIWISCV QAQTGTFSAV LAFGDSILDT GNNNLLMTVS RGNFLPYGRD FPHRIPTGRF GNGRVLSDLV ASGLGVKDLL PAFRSPFLKN
101: SELATGVCFA SGGSGLDKFT ASIQGVIWVQ DQVSDFQRYL EKLNQQVGDA AKVKEIIANA VILVSAGNND LAITYFSTPK RQTRYTVQAY TDMLIGWKTT
201: FINSLYDLGA RKFAILGTLP LGCLPGARQI TGNLICLPNV NYGARVYNDK VANLVNQYNQ RLPNGKFVYI DMYNSLLEVI NNPSQYGFTT AKPCCCSVMT
301: PIPCLRSGSH VFWDFAHPSE KAYKTVLP
101: SELATGVCFA SGGSGLDKFT ASIQGVIWVQ DQVSDFQRYL EKLNQQVGDA AKVKEIIANA VILVSAGNND LAITYFSTPK RQTRYTVQAY TDMLIGWKTT
201: FINSLYDLGA RKFAILGTLP LGCLPGARQI TGNLICLPNV NYGARVYNDK VANLVNQYNQ RLPNGKFVYI DMYNSLLEVI NNPSQYGFTT AKPCCCSVMT
301: PIPCLRSGSH VFWDFAHPSE KAYKTVLP
Arabidopsis Description
GDSL-like Lipase/Acylhydrolase family protein [Source:UniProtKB/TrEMBL;Acc:B3H5G5]
SUBAcon: [extracellular,plasma membrane]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.