CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040686.1-P	Field mustard	extracellular, plasma membrane	99.72	99.72
CDX95394	Canola	extracellular	96.01	96.01
AT3G53100.1	Thale cress	extracellular	87.46	87.46
PGSC0003DMT400088508	Potato	extracellular	29.34	64.78
PGSC0003DMT400021670	Potato	extracellular	60.97	61.49
Solyc10g085740.1.1	Tomato	extracellular	60.4	60.92
CDX80889	Canola	extracellular, plasma membrane	60.11	59.77
VIT_08s0007g04300.t01	Wine grape	extracellular, vacuole	61.54	59.5
CDY04898	Canola	extracellular, plasma membrane	58.69	58.86
CDY14175	Canola	extracellular, plasma membrane	54.42	58.41
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	58.12	56.98
CDY09169	Canola	endoplasmic reticulum, extracellular, plasma membrane	57.55	55.96
CDY11271	Canola	extracellular, plasma membrane	58.4	55.86
CDY50286	Canola	extracellular	57.27	55.83
Solyc09g008690.1.1	Tomato	extracellular	37.04	55.56
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	55.56	55.24
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	56.7	54.97
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	56.13	54.87
Os03t0683800-01	Rice	plastid	55.27	54.34
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	55.56	53.87
PGSC0003DMT400033798	Potato	extracellular	35.9	53.85
TraesCS4B01G027100.1	Wheat	endoplasmic reticulum, plasma membrane	55.56	53.57
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	55.56	53.13
GSMUA_Achr2P12520_001	Banana	plastid	58.69	52.02
CDY30167	Canola	extracellular	51.0	50.56
CDY56196	Canola	vacuole	51.57	50.56
CDY39070	Canola	extracellular	15.67	37.16
CDX85927	Canola	extracellular, mitochondrion, plastid	14.24	36.23
CDY30744	Canola	extracellular	32.48	33.73
CDY45740	Canola	plasma membrane	32.19	33.43
CDX75880	Canola	vacuole	29.06	32.9
CDX72994	Canola	extracellular	31.62	32.74
CDX96486	Canola	extracellular, plasma membrane	31.62	32.74
CDY15393	Canola	cytosol	19.94	31.82
CDY15394	Canola	extracellular	10.83	31.15
CDY25788	Canola	extracellular	30.2	31.09
CDY67583	Canola	extracellular	30.2	30.9
CDY44153	Canola	cytosol	30.77	30.68
CDY43409	Canola	extracellular, plasma membrane	29.63	30.59
CDY04705	Canola	cytosol, mitochondrion, plasma membrane, plastid	30.77	30.42
CDY54289	Canola	extracellular	28.49	29.07
CDY45771	Canola	extracellular, plasma membrane	27.64	28.45
CDY67584	Canola	extracellular, plasma membrane	27.35	28.15
CDY13524	Canola	extracellular, plasma membrane	27.35	28.15
CDY39069	Canola	extracellular, plasma membrane	27.35	28.15
CDX89030	Canola	plasma membrane	23.65	27.67
CDY13523	Canola	golgi, plasma membrane, plastid	25.36	25.65
CDY57589	Canola	plasma membrane	29.91	22.48
CDY54290	Canola	extracellular	18.23	21.26

Protein Annotations

EnsemblPlants:CDX76226	EnsemblPlantsGene:GSBRNA2T00126547001	Gene3D:3.40.50.1110	GO:A0A078CGA4	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF146	PFAM:PF00657	ProteinID:CDX76226	ProteinID:CDX76226.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52266	TMHMM:TMhelix	UniParc:UPI0004EE1C09	MapMan:35.1	:

Description

BnaA04g04900D

Coordinates

chrLK031806:+:1952542..1954400

Molecular Weight (calculated)

38984.7 Da

IEP (calculated)

8.118

GRAVY (calculated)

0.002

Length

351 amino acids

Sequence
(BLAST)

001: MQEMRVSRFW VLVLVSCFFC KSKGAIVPAL IMFGDSIVDV GNNNNLLSIV KSNFPPYGRD FTNQTPTGRF CNGKLAVDFS AEYLGFSSYP PAFLNREARN
101: EDFLIGANFA SASSGYYDAT SVPFGAIPLT RQLSYYRTYQ NRVRSMIGRE RARTMFSKSI HILSAGSSDF LQNYYINPLL NILNTPEQFS DTLMRSYSEF
201: IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER LNNDAVMFNT KLESTTQTLM KRHSGLKLVA FNAYQPLMDI ITNPYDNGFF ETKRACCGTG
301: TIETSFLCNS LSLGTCSNAT GYVFWDGFHP TEAVYELLAG QLLSQGISLI S

Best Arabidopsis Sequence Match ( AT3G53100.1 )
(BLAST)

001: MQKMRVSGFR VLLLVSCFFC KSKGAVVPAL IMFGDSIVDV GNNNNLLSIV KSNFLPYGRD FIDQRPTGRF CNGKLAVDFS AEYLGFSSYP PAFLSREASN
101: ENILIGANFA SASSGYYDAT SVPFGSISLT RQLSYYRAYQ NRVTRMIGRG NARILFSRGI HILSAGSSDF LQNYYINPLL NILNTPDQFA DILLRSFSEF
201: IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER LNNDAIMFNT KLENTTRLLM NRHSGLRLVA FNVYQPFLDI ITNPTDNGFF ETKRACCGTG
301: TIETSFLCNS LSFGTCVNAT GYVFWDGFHP TEAVNELLAG QLLGQGISLI N

Arabidopsis Description

GDSL esterase/lipase At3g53100 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPI9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.