Factsheet for GSMUA_Achr4P17640_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400088508	Potato	extracellular	31.28	70.44
Os03t0683800-01	Rice	plastid	68.44	68.63
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	67.32	68.27
GSMUA_Achr2P12520_001	Banana	plastid	74.3	67.17
VIT_08s0007g04300.t01	Wine grape	extracellular, vacuole	67.6	66.67
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	67.32	66.57
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	66.48	66.3
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	67.88	66.21
TraesCS4B01G027100.1	Wheat	endoplasmic reticulum, plasma membrane	67.32	66.21
AT5G03810.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	64.8	65.72
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	65.92	65.19
CDX80889	Canola	extracellular, plasma membrane	64.25	65.16
Bra005782.1-P	Field mustard	extracellular, plasma membrane	64.25	65.16
Bra005781.1-P	Field mustard	plastid	37.99	65.07
KRH26558	Soybean	endoplasmic reticulum, extracellular, vacuole	63.41	64.86
PGSC0003DMT400021670	Potato	extracellular	62.85	64.66
Solyc10g085740.1.1	Tomato	extracellular	62.57	64.37
Bra028818.1-P	Field mustard	extracellular, plasma membrane	62.29	63.71
CDY04898	Canola	extracellular, plasma membrane	62.01	63.43
PGSC0003DMT400001233	Potato	extracellular, plasma membrane	61.17	62.04
KRH30531	Soybean	extracellular, vacuole	60.89	61.76
Solyc11g066700.1.1	Tomato	extracellular, plasma membrane	60.89	61.41
CDY14175	Canola	extracellular, plasma membrane	55.31	60.55
CDY09169	Canola	endoplasmic reticulum, extracellular, plasma membrane	60.61	60.11
CDY50286	Canola	extracellular	60.34	60.0
Bra020216.1-P	Field mustard	extracellular	60.34	60.0
AT5G22810.1	Thale cress	extracellular	60.06	59.89
GSMUA_Achr7P08930_001	Banana	endoplasmic reticulum, extracellular	60.06	59.89
CDX95394	Canola	extracellular	58.1	59.26
GSMUA_Achr2P16800_001	Banana	extracellular, vacuole	59.22	59.22
CDY11271	Canola	extracellular, plasma membrane	60.61	59.13
KRH25150	Soybean	extracellular	50.0	58.5
AT5G03820.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	62.85	58.44
Bra040686.1-P	Field mustard	extracellular, plasma membrane	56.98	58.12
CDX76226	Canola	extracellular, plasma membrane	56.98	58.12
AT3G53100.1	Thale cress	extracellular	56.98	58.12
PGSC0003DMT400033798	Potato	extracellular	36.87	56.41
Solyc09g008690.1.1	Tomato	extracellular	36.59	55.98
KRH22747	Soybean	mitochondrion	65.64	55.29

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	InterPro:GDSL	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016298	GO:GO:0016787	GO:GO:0016788	EnsemblPlantsGene:GSMUA_Achr4G17640_001
EnsemblPlants:GSMUA_Achr4P17640_001	EnsemblPlants:GSMUA_Achr4T17640_001	InterPro:IPR036514	InterPro:Lipase_GDSL_AS	UniProt:M0SPS7	PFAM:PF00657
ScanProsite:PS01098	PANTHER:PTHR22835	PANTHER:PTHR22835:SF146	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295BD75	:	:	:

Description

GDSL esterase/lipase At5g03810 [Source:GMGC_GENE;Acc:GSMUA_Achr4G17640_001]

Coordinates

chr4:-:17694388..17696187

Molecular Weight (calculated)

38100.4 Da

IEP (calculated)

7.783

GRAVY (calculated)

0.048

Length

358 amino acids

Sequence
(BLAST)

001: MGLRRGRTET TMILVSVVHV LAAMVGVSSG QGLVPGVIIF GDSVVDAGNN NHLSTLVRAN FPPYGRDFAQ HSPTGRFCNG KLATDFTVEN LGFTSYPPAY
101: LSQDATGNNL LHGANFASAA SGYLDSTANL YQAISLTQQL QYYKEYQSKV ERVAGKPKAA ALFAGAIYLL SAGSSDYVQN YYINPLLSGS YTPDQFSDLL
201: LQSFTTFVQN LYNMGGRRVG VTSLPPMGCL PAAVTLFGGG SNGCVARLNK DAVAFNKKMN AAAQALKKSH PELKLVVFDI YNPLLDLIDH PGKNGFFEAR
301: KACCGTGTIE TSLLCNAGSP GTCSNATGYV FWDSFHPSEA ANKVLADALL LQGIDLIS

Best Arabidopsis Sequence Match ( AT5G03810.1 )
(BLAST)

001: MKMFITMSMC LSVIACFYAG VGTGETLVPA LIIMGDSVVD AGNNNHRITL VKANFPPYGR DFVAHSATGR FSNGKLATDF TAENLGFTSY PVAYLSQEAN
101: ETNLLTGANF ASGASGFDDA TAIFYNAITL SQQLKNYKEY QNKVTNIVGK ERANEIFSGA IHLLSTGSSD FLQSYYINPI LNRIFTPDQY SDHLLRSYST
201: FVQNLYGLGA RRIGVTTLPP LGCLPAAITL FGGVGNNMCV ERLNQDAVSF NTKLNNTSIN LTNNLPGLKL VVFDIYNPLL NMVINPVEYG FFESRRACCG
301: TGTMETSFLC NALSVGTCSN ATNYVFWDGF HPSEAANRVI ANNLLVQGIP LIS

Arabidopsis Description

GDSL esterase/lipase At5g03810 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN0]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.