CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26558	Soybean	endoplasmic reticulum, extracellular, vacuole	78.35	95.14
KRH30531	Soybean	extracellular, vacuole	62.35	75.07
PGSC0003DMT400001233	Potato	extracellular, plasma membrane	60.47	72.8
Solyc11g066700.1.1	Tomato	extracellular, plasma membrane	60.71	72.68
KRH25150	Soybean	extracellular	51.76	71.9
CDY50286	Canola	extracellular	58.12	68.61
CDY09169	Canola	endoplasmic reticulum, extracellular, plasma membrane	58.12	68.42
Bra020216.1-P	Field mustard	extracellular	57.88	68.33
AT5G22810.1	Thale cress	extracellular	57.65	68.25
GSMUA_Achr4P17640_001	Banana	extracellular, plasma membrane	55.29	65.64
Os03t0683800-01	Rice	plastid	50.59	60.22
KRH23361	Soybean	nucleus	49.41	59.49
TraesCS4A01G285700.1	Wheat	endoplasmic reticulum, plasma membrane	48.94	58.92
KRH47190	Soybean	nucleus	48.24	58.07
TraesCS4D01G024900.1	Wheat	endoplasmic reticulum, plasma membrane	49.41	58.01
HORVU4Hr1G004100.1	Barley	endoplasmic reticulum, plasma membrane	49.88	57.77
TraesCS4B01G027100.1	Wheat	endoplasmic reticulum, plasma membrane	49.18	57.42
KRH09971	Soybean	nucleus	46.12	57.31
Zm00001d033522_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	48.24	57.1
KRH44252	Soybean	nucleus	48.94	56.99
EER93662	Sorghum	endoplasmic reticulum, plasma membrane	48.47	56.91
GSMUA_Achr2P12520_001	Banana	plastid	48.24	51.77
KRG89977	Soybean	cytosol	11.76	40.0
KRH61021	Soybean	mitochondrion	13.88	36.88
KRH17464	Soybean	extracellular	29.65	34.33
KRH05981	Soybean	extracellular	29.18	33.88
KRH72762	Soybean	cytosol	12.71	30.68

Protein Annotations

EntrezGene:100804640	Gene3D:3.40.50.1110	MapMan:35.1	UniProt:A0A0R0H7J4	EMBL:ACUP02008432	InterPro:GDSL
EnsemblPlantsGene:GLYMA_13G320600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	EnsemblPlants:KRH22747	ProteinID:KRH22747	ProteinID:KRH22747.1
PFAM:PF00657	PANTHER:PTHR22835	PANTHER:PTHR22835:SF288	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266
TMHMM:TMhelix	UniParc:UPI0006ED7150	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:41494214..41496999

Molecular Weight (calculated)

46834.3 Da

IEP (calculated)

9.121

GRAVY (calculated)

-0.007

Length

425 amino acids

Sequence
(BLAST)

001: MNINYGRKVR LLKKLVQLSM SRARLYFPAN PDPLHAIERR PFPQIISSQY YNAPFQIHHF LSLLKKLIAE EKLKSMGFSS YFLTSLLLVV VFNVAKGQPL
101: VPALFIFGDS VVDVGNNNHL YTVVKANFPP YGRDFKNHNP TGRFCNGKLA SDYTAENLGF TSYPPAYLNL KAKGNNLLNG ANFASAASGY YDPTAKLYHA
201: IPLSQQLEHY KECQNILVGT VGQPNASSII SGAIYLISAG NSDFIQNYYI NPLLYKVYTA DQFSDILLQS YATFIQNLYA LGARRIGVTS LPPMGCLPAA
301: ITLFGSDSNR CVVKLNNDSV NFNKKLNTTS QSLQKSLSGL KLVILDIYQP LYDLVTKPSE NGFFEARKAC CGTGLLETSV LCNQKSIGTC ANASEYVFWD
401: GFHPSDAANK VLSDDLLAAG ISLIS

Best Arabidopsis Sequence Match ( AT5G22810.1 )
(BLAST)

001: MGFSGIWLNL YVVFGSLMVF ERMVVMKAQP LVPAIFIFGD SVVDVGNNND IYTIVKANFP PYGRDFTTHT PTGRFCNGKL ATDFTAENLG FKSYPQAYLS
101: KKAKGKNLLI GANFASAASG YYDGTAKLYS AISLPQQLEH YKDYISRIQE IATSNNNSNA SAIISNGIYI VSAGSSDFIQ NYYINPLLYR DQSPDEFSDL
201: LILSYSSFIQ NLYSLGARRI GVTTLPPLGC LPAAITVVGP HEGGCSEKLN NDAISFNNKL NTTSQDLKRN LIGLNLVVFD IYQPLYDLAT RPSEFGFAEA
301: RRACCGTGLL ETSILCNPKS VGTCNNATEY VFWDGFHPTE AANKILADNL LVSGISLIS

Arabidopsis Description

GDSL-like Lipase/Acylhydrolase superfamily protein [Source:TAIR;Acc:AT5G22810]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.